NEWS.md

In CRMetrics: Cell Ranger Output Filtering and Metrics Visualization

CRMetrics 0.3.2

• Fixed error in plotFilteredCells
• Added author e-mail (missing)

CRMetrics 0.3.1

• Minor bug fix for issue #52

CRMetrics 0.3.0

• Several minor bug fixes
• Updated createEmbedding upon resolve of https://github.com/kharchenkolab/conos/issues/123
• Updated DESCRIPTION
• Added checks for detectDoublets
• Added possibility for multiple paths for "data.path" argument in initialize
• Changed depth calculation from Conos depth to raw depth, i.e., column sums
• Added plotting palette to object through argument pal
• Fixed bug for filterCms where species was not forwarded to getMitoFraction internally
• Moved adding list of CMs to CRMetrics object from addDetailedMetrics() to addCms() since this is more logical
• detectDoublets can now export Python script with argument export = TRUE
• Added addDoublets function to add doublet results generated with exported Python scripts
• Updated vignette

CRMetrics 0.2.3

• Updated tests and examples to pass CRAN checks

CRMetrics 0.2.2

• Prepared for submission to CRAN

CRMetrics 0.2.1

• Added a NEWS.md file to track changes to the package.

CRMetrics documentation built on April 12, 2025, 2:26 a.m.