R/data-cockroach.R

In CoDaLoMic: Compositional Models to Longitudinal Microbiome Data

#' cockroach dataset
#'
#' Gut microbiome dataset of a Blatella germanica cockroach treated by kanamycin during three periods of time (days: 1–10,  36–45, 71–80). The data is extracted from Marín-Miret et al (2024), more specifically, the data is the information of the K3 cockroach in the article. The dataset contains 105 time points and 210 genera.
#'
#'
#' @docType data
#' @keywords datasets
#' @name cockroach
#' @usage data(cockroach)
#' @format A data frame with 105 rows and 211 columns.
#' @references Marín-Miret, J., Pérez-Cobas, A. E., Domínguez-Santos, R., Pérez-Rocher, B., Latorre, A., & Moya, A. (2024). Adaptability of the gut microbiota of the German cockroach Blattella germanica to a periodic antibiotic treatment. Microbiological Research, 287, 127863.


"cockroach"