boxResidMonth: A box plot of WRTDS residuals by month

In EGRET: Exploration and Graphics for RivEr Trends

A box plot of WRTDS residuals by month

Description

This function produces a boxplot of the residuals from WRTDS, expressed in natural log concentration units. It provides an alternative for viewing the standardized residuals, where the each residual is divided by its estimated standard error. The monthly boxplot widths are proportional to the square root of the sample size. The residuals for a censored value are determined as the difference between the natural log of the average of the upper and lower. bounds on the sample value, minus the log space estimate of concentration.

Although there are a lot of optional arguments to this function, most are set to a logical default.

Data come from named list, which contains a Sample dataframe with the sample data, and an INFO dataframe with metadata

Usage

boxResidMonth(eList, stdResid = FALSE, las = 1, printTitle = TRUE,
  cex = 0.8, cex.axis = 1.1, cex.main = 1.1, font.main = 2,
  tinyPlot = FALSE, customPar = FALSE, monthLab = 1,
  randomCensored = FALSE, ...)

Arguments

eList	named list with at least the Sample and INFO dataframes
stdResid	logical variable, if TRUE it uses the standardized residual, if FALSE it uses the actual, default is FALSE
las	numeric in 0,1,2,3; the style of axis labels
printTitle	logical variable if TRUE title is printed, if FALSE not printed (this is best for a multi-plot figure)
cex	numerical value giving the amount by which plotting symbols should be magnified
cex.axis	magnification to be used for axis annotation relative to the current setting of cex
cex.main	magnification to be used for main titles relative to the current setting of cex
font.main	font to be used for plot main titles
tinyPlot	logical variable, if TRUE plot is designed to be plotted small, as a part of a multipart figure, default is FALSE
customPar	logical defaults to FALSE. If TRUE, par() should be set by user before calling this function
monthLab	object of monthLabel class, or numeric represented the short code, or character representing the descriptive name.
randomCensored	logical. Show censored residuals as randomized. Default = FALSE.
...	arbitrary graphical parameters that will be passed to genericEGRETDotPlot function (see ?par for options)

See Also

boxplot

Examples

eList <- Choptank_eList
# Water year:
boxResidMonth(eList)
# Graphs consisting of Jun-Aug
eList <- setPA(eList, paStart = 6, paLong = 3)
boxResidMonth(eList)

EGRET documentation built on April 18, 2023, 5:09 p.m.