EmpiricalCalibration: Routines for Performing Empirical Calibration of Observational Study Estimates

Routines for performing empirical calibration of observational study estimates. By using a set of negative control hypotheses we can estimate the empirical null distribution of a particular observational study setup. This empirical null distribution can be used to compute a calibrated p-value, which reflects the probability of observing an estimated effect size when the null hypothesis is true taking both random and systematic error into account.

AuthorMartijn Schuemie, Marc Suchard
Date of publication2016-08-16 19:47:12
MaintainerMartijn Schuemie <schuemie@ohdsi.org>
LicenseApache License 2.0
Version1.2.0
https://github.com/OHDSI/EmpiricalCalibration

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Files

EmpiricalCalibration
EmpiricalCalibration/inst
EmpiricalCalibration/inst/CITATION
EmpiricalCalibration/inst/doc
EmpiricalCalibration/inst/doc/EmpiricalCalibrationVignette.R
EmpiricalCalibration/inst/doc/EmpiricalCalibrationVignette.pdf
EmpiricalCalibration/inst/doc/EmpiricalCalibrationVignette.Rmd
EmpiricalCalibration/NAMESPACE
EmpiricalCalibration/NEWS
EmpiricalCalibration/data
EmpiricalCalibration/data/caseControl.rda
EmpiricalCalibration/data/sccs.rda
EmpiricalCalibration/data/cohortMethod.rda
EmpiricalCalibration/R
EmpiricalCalibration/R/Data.R EmpiricalCalibration/R/EmpiricalCalibration.R EmpiricalCalibration/R/Simulation.R EmpiricalCalibration/R/EmpiricalCalibrationUsingAsymptotics.R EmpiricalCalibration/R/Plots.R EmpiricalCalibration/R/EmpiricalCalibrationUsingMcmc.R EmpiricalCalibration/R/ConfidenceIntervalCalibration.R EmpiricalCalibration/R/EmpiricalCalibrationUsingPLikelihood.R
EmpiricalCalibration/vignettes
EmpiricalCalibration/vignettes/EmpiricalCalibrationVignette.Rmd
EmpiricalCalibration/README.md
EmpiricalCalibration/MD5
EmpiricalCalibration/build
EmpiricalCalibration/build/vignette.rds
EmpiricalCalibration/DESCRIPTION
EmpiricalCalibration/man
EmpiricalCalibration/man/plotCiCalibration.Rd EmpiricalCalibration/man/calibrateConfidenceInterval.Rd EmpiricalCalibration/man/simulateControls.Rd EmpiricalCalibration/man/plotCalibration.Rd EmpiricalCalibration/man/computeTraditionalP.Rd EmpiricalCalibration/man/caseControl.Rd EmpiricalCalibration/man/fitMcmcNull.Rd EmpiricalCalibration/man/fitNull.Rd EmpiricalCalibration/man/fitSystematicErrorModel.Rd EmpiricalCalibration/man/plotTrueAndObserved.Rd EmpiricalCalibration/man/plotForest.Rd EmpiricalCalibration/man/plotMcmcTrace.Rd EmpiricalCalibration/man/EmpiricalCalibration.Rd EmpiricalCalibration/man/plotCalibrationEffect.Rd EmpiricalCalibration/man/cohortMethod.Rd EmpiricalCalibration/man/sccs.Rd EmpiricalCalibration/man/calibrateP.Rd

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