plotMcmcTrace: Plot the MCMC trace
In EmpiricalCalibration: Routines for Performing Empirical Calibration of Observational Study Estimates
plotMcmcTrace R Documentation
Plot the MCMC trace
Description
Plot the MCMC trace
Usage
plotMcmcTrace(mcmcNull, fileName = NULL)
Arguments
mcmcNull
An object of type mcmcNull as generated using the fitMcmcNull
function.
fileName
Name of the file where the plot should be saved, for example 'plot.png'. See the
function ggsave in the ggplot2 package for supported file formats.
Details
Plot the trace of the MCMC for diagnostics purposes.
Examples
## Not run:
data(sccs)
negatives <- sccs[sccs$groundTruth == 0, ]
null <- fitMcmcNull(negatives$logRr, negatives$seLogRr)
plotMcmcTrace(null)
## End(Not run)
EmpiricalCalibration documentation built on Sept. 30, 2024, 9:12 a.m.
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| plotMcmcTrace | R Documentation |
Plot the MCMC trace
Description
Plot the MCMC trace
Usage
plotMcmcTrace(mcmcNull, fileName = NULL)
Arguments
mcmcNull |
An object of type |
fileName |
Name of the file where the plot should be saved, for example 'plot.png'. See the
function |
Details
Plot the trace of the MCMC for diagnostics purposes.
Examples
## Not run:
data(sccs)
negatives <- sccs[sccs$groundTruth == 0, ]
null <- fitMcmcNull(negatives$logRr, negatives$seLogRr)
plotMcmcTrace(null)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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