Man pages for ExpGenetic
Non-Additive Expression Analysis of Hybrid Offspring
| basepreplot | Plot the base frequency distribution diagram for small RNA... |
| Countfilter | Filtering out lowly expressed genes based on count |
| F1_miRNA_count | Count table of miRNAs in F1 (F1: the polyploid progeny). |
| F1_miRNA_rpm | RPM table of miRNAs in F1 (F1: the polyploid progeny). |
| F1_sRNA_seq | All sRNA sequences in F1 (F1: the polyploid progeny). |
| Get12Bins | Non-additive expression analysis |
| GetDAtable | Non-additive expression analysis |
| GetDEdata | Get the results of differential expression analysis. |
| lenplot | Plot the length distribution diagram for small RNAs (sRNAs) |
| mirnapredata | Base frequency distribution of small RNA (sRNA) |
| P1_miRNA_count | Count table of miRNAs in P1 (P1: one of the parents). |
| P1_miRNA_rpm | RPM table of miRNAs in P1 (P1: one of the parents). |
| P1_sRNA_seq | All sRNA sequences in P1 (P1: one of the parents). |
| P2_miRNA_count | Count table of miRNAs in P2 (P2: one of the parents). |
| P2_miRNA_rpm | RPM table of miRNAs in P2 (P2: one of the parents). |
| P2_sRNA_seq | All sRNA sequences in P2 (P2: one of the parents). |
| polyDESeq | Make a Triangle Diagram |
| Rpmfilter | Filtering out lowly expressed genes based on RPM |
| srnapredata | Length distribution of small RNAs (sRNAs) |
| VennData | Get the details of the Venn Diagram |
| VennPlot | Make a three-set Venn Diagram |
