NEWS.md

In FishResp: Analytical Tool for Aquatic Respirometry

FishResp v1.1.2

Improving quality and performance of the import.meas function

Bug fixes:

• head & tail error fix: removing first or last phase(s) if its length was significantly reduced (i.e. <90% of expected length). This bug fix ensures that the dataset does not include shortened or incomplete measurement phases, which caused errors
• delete time duplications and add empty lines for missing seconds. This bug fix addresses the issue of duplicate timestamps and missing seconds in the imported dataset
• remove any measurement phase with only one value to avoid errors in the correct.meas function

Notes:

• clarity and structure of the README section was improved
• Contributors were moved from the author list to the contributor page of the FishResp website: https://fishresp.org/people/

FishResp v1.1.1

Time-related issues have been fixed offering more flexibility for the analysis of multinight measurements and M->F and M->W phase transitions.

Major changes:

• add stop.meas.date and stop.meas.date arguments to import.meas()
• add the meas.to.flush argument to the import.meas() function

Bug fixes:

• fix the warning related to AM/PM after updating R core
• time index is modified for each meas.phase in import.meas()
• buffer is added to import.meas() to avoid tail error
• fix code for appending time index to meas phases

FishResp v1.1.0

Major changes:

• add the new function 'prepare.data'
• add an example data for 'prepare.data', data contributor: Erik Gill.
• add the new function 'pyroscience.pumpresp'
• add an example data for 'pyroscience.pumpresp', data contributor: Jenni Prokkola.
• fill the 'README.md' file.
• add the 'NEWS.md' file for tracking changes

Bug fixes:

• solve an issue with comma separator in raw data
• fix a bug with NA and 9999 in slope extraction
• fix a bug with empty lines in the end of a file with raw data

Notes:

This and following versions of the R package will be developed using Git and hosted on GitHub (in addition to CRAN): https://github.com/embedded-sergey/FishResp-Rpackage

Thanks to Erik Gill and Jenni Prokkola for data contributions.

FishResp v1.0.3 [LTS]

This version was described in the academic publication: Morozov et al. (2019) https://doi.org/10.1093/conphys/coz003

FishResp documentation built on April 3, 2025, 8:39 p.m.