GeneralizedUmatrix: Credible Visualization for Two-Dimensional Projections of Data

Projections are common dimensionality reduction methods, which represent high-dimensional data in a two-dimensional space. However, when restricting the output space to two dimensions, which results in a two dimensional scatter plot (projection) of the data, low dimensional similarities do not represent high dimensional distances coercively [Thrun, 2018] <DOI: 10.1007/978-3-658-20540-9>. This could lead to a misleading interpretation of the underlying structures [Thrun, 2018]. By means of the 3D topographic map the generalized Umatrix is able to depict errors of these two-dimensional scatter plots. The package is derived from the book of Thrun, M.C.: "Projection Based Clustering through Self-Organization and Swarm Intelligence" (2018) <DOI:10.1007/978-3-658-20540-9> and the main algorithm called simplified self-organizing map for dimensionality reduction methods is published in <DOI: 10.1016/j.mex.2020.101093>.

Package details

AuthorMichael Thrun [aut, cre, cph] (<https://orcid.org/0000-0001-9542-5543>), Felix Pape [ctb, ctr], Tim Schreier [ctb, ctr], Luis Winckelman [ctb, ctr], Alfred Ultsch [ths]
MaintainerMichael Thrun <m.thrun@gmx.net>
LicenseGPL-3
Version1.2.1
URL http://www.deepbionics.org
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("GeneralizedUmatrix")

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GeneralizedUmatrix documentation built on Oct. 25, 2020, 5:07 p.m.