HWETriangBF2: Evaluates the Bayes factor in the k=2 allele case with a...
In HWEBayes: Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing.
Description
Usage
Arguments
Value
Author(s)
References
See Also
Examples
Description
Function to evaluate the Bayes factor \Pr(n|\mbox{ HWE })/\Pr(n|\mbox{ saturated model }) in the k=2 allele case and with a conjugate (Dirichlet) priors under the saturated model and a "triangular" distribution under the null. the latter is the marginal prior distribution under the (1,1,1) Dirichlet prior under the saturated model.
Usage
1
HWETriangBF2(nvec)
Arguments
nvec
vector of genotype frequencies in the order n_{11}, n_{21}, n_{22}.
Value
Bayes factor is returned.
Author(s)
Jon Wakefield (jonno@u.washington.edu)
References
Wakefield, J. (2010). Bayesian methods for examining Hardy-Weinberg
equilibrium. Biometrics; Vol 66:257-65
See Also
Examples
1
HWETriangBF2(nvec=c(88,10,2))
HWEBayes documentation built on May 2, 2019, 11:07 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) References See Also Examples
Description
Function to evaluate the Bayes factor \Pr(n|\mbox{ HWE })/\Pr(n|\mbox{ saturated model }) in the k=2 allele case and with a conjugate (Dirichlet) priors under the saturated model and a "triangular" distribution under the null. the latter is the marginal prior distribution under the (1,1,1) Dirichlet prior under the saturated model.
Usage
1 | HWETriangBF2(nvec)
|
Arguments
nvec |
vector of genotype frequencies in the order n_{11}, n_{21}, n_{22}. |
Value
Bayes factor is returned.
Author(s)
Jon Wakefield (jonno@u.washington.edu)
References
Wakefield, J. (2010). Bayesian methods for examining Hardy-Weinberg equilibrium. Biometrics; Vol 66:257-65
See Also
Examples
1 | HWETriangBF2(nvec=c(88,10,2))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.