TriangNormHWE: Evaluates the normalizing constant under the HWE model, for...
In HWEBayes: Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing.
Description
Usage
Arguments
Value
Author(s)
References
See Also
Examples
Description
Function to evaluate the normalizing constant given a "triangular" prior and the HWE model, in the k=2 allele case. This prior results from marginalizing the conjugate Dirichlet prior with parameters (1,1,1) on the genotype frequencies under the alternative.
Usage
1
TriangNormHWE(nvec)
Arguments
nvec
vector of genotype frequencies in the order n_{11}, n_{21}, n_{22}.
Value
Normalizing constant is returned.
Author(s)
Jon Wakefield (jonno@u.washington.edu)
References
Wakefield, J. (2010). Bayesian methods for examining Hardy-Weinberg
equilibrium. Biometrics; Vol 66:257-65
See Also
DirichNormHWE, DirichNormSat, DirichSampHWE, DirichSampSat, HWEDirichBF2, TriangNormHWE
Examples
1
2
nvec <- c(88,10,2)
TriangNormHWE(nvec)
HWEBayes documentation built on May 2, 2019, 11:07 a.m.
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Description Usage Arguments Value Author(s) References See Also Examples
Description
Function to evaluate the normalizing constant given a "triangular" prior and the HWE model, in the k=2 allele case. This prior results from marginalizing the conjugate Dirichlet prior with parameters (1,1,1) on the genotype frequencies under the alternative.
Usage
1 | TriangNormHWE(nvec)
|
Arguments
nvec |
vector of genotype frequencies in the order n_{11}, n_{21}, n_{22}. |
Value
Normalizing constant is returned.
Author(s)
Jon Wakefield (jonno@u.washington.edu)
References
Wakefield, J. (2010). Bayesian methods for examining Hardy-Weinberg equilibrium. Biometrics; Vol 66:257-65
See Also
DirichNormHWE, DirichNormSat, DirichSampHWE, DirichSampSat, HWEDirichBF2, TriangNormHWE
Examples
1 2 | nvec <- c(88,10,2)
TriangNormHWE(nvec)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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