baselogit: Calculates a set of baseline logits from a set of...
In HWEBayes: Bayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing.
Description
Usage
Arguments
Details
Value
Author(s)
References
See Also
Examples
Description
Calculates a set of k-1 baseline logits \log(p_1/p_k), ..., \log(p_{k-1}/p_k), from a set of probabilities p_1,...,p_k.
Usage
1
baselogit(probs)
Arguments
probs
A set of probabilities, p_1,...,p_k, where k is the number of alleles.
Details
This function is used by a number of other functions in the package, for example, to provide a parameterization for maximization and for importance sampling in the single f model.
Value
baselogit
Returns the set of k-1 baseline logits, where k is the number of alleles.
Author(s)
Jon Wakefield (jonno@u.washington).
References
Wakefield, J. (2010). Bayesian methods for examining Hardy-Weinberg
equilibrium. Biometrics; Vol 66:257-65
See Also
Examples
1
HWEBayes documentation built on May 2, 2019, 11:07 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) References See Also Examples
Description
Calculates a set of k-1 baseline logits \log(p_1/p_k), ..., \log(p_{k-1}/p_k), from a set of probabilities p_1,...,p_k.
Usage
1 | baselogit(probs)
|
Arguments
probs |
A set of probabilities, p_1,...,p_k, where k is the number of alleles. |
Details
This function is used by a number of other functions in the package, for example, to provide a parameterization for maximization and for importance sampling in the single f model.
Value
baselogit |
Returns the set of k-1 baseline logits, where k is the number of alleles. |
Author(s)
Jon Wakefield (jonno@u.washington).
References
Wakefield, J. (2010). Bayesian methods for examining Hardy-Weinberg equilibrium. Biometrics; Vol 66:257-65
See Also
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.