Man pages for HapEstXXR
Multi-Locus Stepwise Regression
| allele1to2 | Convert genotype matrix from two different types |
| catt | Cochrane armitage trend test (CATT) for SNP genotypes |
| coding.baseline.allele | Standardization of coding alleles |
| dec2bin | Decimal To Binary Conversion |
| HapEstXXR-package | Mulit-locus stepwise regression (MSR) |
| itegeppXXR | Haplotype estimation routine for single individual data |
| maf | Minor alle frequencies |
| makeHaploviewInputFile | Make Haploview input files |
| makePlinkInputFile | Make PLINK input files |
| msr | Multi-locus stepwise regression |
| multi.snp.test | Internal function used for multi-locus associations tests. |
| order.families | Ordering of nuclear family data |
| powerset | Generating power set of a set |
| read.data | Read data from different input files |
| read.haploview | Read a haploview dataset |
| single.haplotype.test | single haplotype test |
| single.snp.test | Regression analysis with single SNP genotypes as independent... |
