TSIXTriAllelics: Tri-allelic polymorphisms on the X chromosome of the TSI...
In HardyWeinberg: Statistical Tests and Graphics for Hardy-Weinberg Equilibrium

TSIXTriAllelics

R Documentation

Tri-allelic polymorphisms on the X chromosome of the TSI population

Description

This dataframe contains genotype counts for six three-allelic polymorphisms (A,B,C) on chromosome X of a sample of individuals from the TSI population (Tuscany, Italy) of the 1,000 genomes project.

Usage

data(TSIXTriAllelics)

Format

A data frame with 6 observations on the following 10 variables.

ID: Identifier of the polymorphism
A: Male A genotype count
B: Male B genotype count
C: Male C genotype count
AA: Female AA genotype count
AB: Female AB genotype count
AC: Female AC genotype count
BB: Female BB genotype count
BC: Female BC genotype count
CC: Female CC genotype count

Source

Data taken from the 1,000 genomes project at www.internationalgenome.org

References

Graffelman, J. and Ortoleva, L. (2020) A network algorithm for the X chromosomal exact test for Hardy-Weinberg equilibrium with multiple alleles. Under review.