Geneset.intersectSelection: Intersection over resulting gene sets of 'PathwaysIter'...

In IntClust: Integration of Multiple Data Sets with Clustering Techniques

Description

Internal function of Geneset.intersect.

Usage

Geneset.intersectSelection(list.output, sign = 0.05, names = NULL,
  seperatetables = FALSE, separatepvals = FALSE)

Arguments

list.output	The output of the PathwaysIter function.
sign	The significance level to be handled for cutting of the pathways. Default is 0.05.
names	Optional. Names of the methods. Default is NULL.
seperatetables	Logical. If TRUE, a separate element is created per cluster containing the pathways for each iteration. Default is FALSE.
separatepvals	Logical. If TRUE, the p-values of the each iteration of each pathway in the intersection is given. If FALSE, only the mean p-value is provided. Default is FALSE.

IntClust documentation built on May 2, 2019, 5:51 a.m.