An R package to deal with point sets from single molecule localization microscopy. This package provides three sets of functionalities: - data input: read SMLM data as point sets either from csv files or from TIFF images - registration: point sets registration using different algorithms - topological data analysis: compute similarity between point sets using persistent homology


The package is available on CRAN.

Download counts (from the RStudio mirror)


To install the development version of this package, run (from within R):


This package depends on these other packages: * data.table * FNN * foreach * parallel * doParallel * proxy * reshape2 * pracma * transport * RANN * ff * aws * dbscan * EBImage (from Bioconductor)

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LOMAR documentation built on March 18, 2022, 6:05 p.m.