Files in LOMAR

Localization Microscopy Data Analysis

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/RcppExports.R R/data_input.R R/registration.R R/LOMAR-package.R R/TDA.R R/utils.R

src/Makevars

src/rips.h

src/RcppExports.cpp

src/dtm.h

src/diag.cpp

src/grid.h

src/kde.h

src/utilities/consistencylist.hpp

src/utilities/timer.h

src/utilities/containers.h

src/utilities/counter.h

src/utilities/circular_list.h

src/utilities/eventqueue.h

src/utilities/memory.h

src/utilities/orderlist.h

src/utilities/indirect.h

src/utilities/binaryheap.h

src/utilities/types.h

src/utilities/property-maps.h

src/utilities/log.h

src/utilities/consistencylist.h

src/utilities/munkres/matrix.h

src/utilities/munkres/munkres.cpp

src/utilities/munkres/matrix.hpp

src/utilities/munkres/munkres.h

src/geometry/polynomial.hpp

src/geometry/simulator.h

src/geometry/simulator.hpp

src/geometry/linear-kernel.h

src/geometry/weighted-l2distance.h

src/geometry/l2distance.h

src/geometry/number-traits.h

src/geometry/distances.h

src/geometry/linalg.h

src/geometry/rational-function.h

src/geometry/kinetic-sort.h

src/geometry/euclidean.hpp

src/geometry/NOTES

src/geometry/distances.hpp

src/geometry/Arbitdistance.h

src/geometry/euclidean.h

src/geometry/linalg.hpp

src/geometry/polynomial.h

src/geometry/weighted-cechdistance.h

src/boost/serialization/binary_object.hpp

src/boost/container/flat_map.hpp

src/boost/container/vector.hpp

src/boost/container/detail/flat_tree.hpp

src/boost/container/detail/copy_move_algo.hpp

src/tdautils/gridUtils.h

src/tdautils/filtrationDiag.h

src/tdautils/dionysusUtils.h

src/tdautils/typecastUtils.h

src/tdautils/ripsL2.h

src/tdautils/filtrationUtils.h

src/tdautils/kernelUtils.h

src/tdautils/ripsArbit.h

src/topology/rips.h

src/topology/lsvineyard.hpp

src/topology/field-arithmetic.h

src/topology/cohomology-persistence.h

src/topology/conesimplex.hpp

src/topology/zigzag-persistence.h

src/topology/simplex.hpp

src/topology/static-persistence.hpp

src/topology/rips.hpp

src/topology/dynamic-persistence.hpp

src/topology/weighted-rips.h

src/topology/image-zigzag-persistence.h

src/topology/lsvineyard.h

src/topology/chain.hpp

src/topology/simplex.h

src/topology/persistence-diagram.hpp

src/topology/cycles.h

src/topology/complex-traits.h

src/topology/filtration.h

src/topology/persistence-diagram.h

src/topology/filtration.hpp

src/topology/conesimplex.h

src/topology/image-zigzag-persistence.hpp

src/topology/vineyard.h

src/topology/chain.h

src/topology/order.h

src/topology/dynamic-persistence.h

src/topology/lowerstarfiltration.h

src/topology/static-persistence.h

inst/test_data/parasaurolophusA.txt

inst/test_data/parasaurolophusC.txt

inst/test_data/parasaurolophusB.txt

inst/test_data/simulated_NUP107_data.csv

inst/test_data/img/alien4_3d.tif

inst/test_data/img/alien1_3d.tif

inst/test_data/img/alien2_3d.tif

inst/test_data/img/alien3_3d.tif

tests/testthat.R tests/testthat/test-utils.R tests/testthat/test-TDA.R tests/testthat/test-data_input.R tests/testthat/test-registration.R man/q2dr.Rd man/jrmpc.Rd man/downsample.Rd man/ary2ps.Rd man/points2img.Rd man/locprec2cov.Rd man/cpd.Rd man/apply_transformation.Rd man/find_elbow.Rd man/roty.Rd man/tr.Rd man/pssk.Rd man/get_kernel_matrix.Rd man/idx2rowcol.Rd man/circle_hough_transform.Rd man/locs2ps.Rd man/ps2ary.Rd man/q2r.Rd man/locs_from_csv.Rd man/point_sets_from_locs.Rd man/icp.Rd man/point_sets_from_tiffs.Rd man/GMM_Wd.Rd man/costWd.Rd man/get_persistence_diagrams.Rd man/rotx.Rd man/standardize_coordinates.Rd man/gradientWd.Rd man/img2ps.Rd man/local_densities.Rd man/rotz.Rd man/Gaussian_Wd.Rd man/points_from_roi.Rd man/restore_coordinates.Rd man/sliced_Wd.Rd man/crop_point_set.Rd man/wgmmreg.Rd

LOMAR documentation built on March 18, 2022, 6:05 p.m.