find_mmseqs2: Find the MMseqs2 binary
In MiscMetabar: Miscellaneous Functions for Metabarcoding Analysis
find_mmseqs2 R Documentation
Find the MMseqs2 binary
Description
Looks for the MMseqs2 binary in three places, in order:
The option MiscMetabar.mmseqs2path (if set).
A local copy installed by install_mmseqs2() in the user data directory.
The system PATH.
Usage
find_mmseqs2()
Value
A character string with the path to the mmseqs binary.
Author(s)
Adrien Taudière
See Also
install_mmseqs2(), is_mmseqs2_installed(), assign_mmseqs2()
MiscMetabar documentation built on June 8, 2026, 5:07 p.m.
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| find_mmseqs2 | R Documentation |
Find the MMseqs2 binary
Description
Looks for the MMseqs2 binary in three places, in order:
The option
MiscMetabar.mmseqs2path(if set).A local copy installed by
install_mmseqs2()in the user data directory.The system
PATH.
Usage
find_mmseqs2()
Value
A character string with the path to the mmseqs binary.
Author(s)
Adrien Taudière
See Also
install_mmseqs2(), is_mmseqs2_installed(), assign_mmseqs2()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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