select_one_sample: Select one sample from a physeq object
In MiscMetabar: Miscellaneous Functions for Metabarcoding Analysis
View source: R/dada_phyloseq.R
select_one_sample R Documentation
Select one sample from a physeq object
Description
Mostly for internal used, for example in function track_wkflow_samples().
Usage
select_one_sample(physeq, sam_name, silent = FALSE)
Arguments
physeq
(required): a phyloseq-class object obtained
using the phyloseq package.
sam_name
(required) The sample name to select
silent
(logical) If true, no message are printing.
Value
A new phyloseq-class object with one sample
Author(s)
Adrien Taudière
Examples
A8_005 <- select_one_sample(data_fungi, "A8-005_S4_MERGED.fastq.gz")
A8_005
MiscMetabar documentation built on Oct. 8, 2024, 1:07 a.m.
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View source: R/dada_phyloseq.R
| select_one_sample | R Documentation |
Select one sample from a physeq object
Description
Mostly for internal used, for example in function track_wkflow_samples().
Usage
select_one_sample(physeq, sam_name, silent = FALSE)
Arguments
physeq |
(required): a |
sam_name |
(required) The sample name to select |
silent |
(logical) If true, no message are printing. |
Value
A new phyloseq-class object with one sample
Author(s)
Adrien Taudière
Examples
A8_005 <- select_one_sample(data_fungi, "A8-005_S4_MERGED.fastq.gz")
A8_005
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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