API for NetRep
Permutation Testing Network Module Preservation Across Datasets

Global functions
CheckFinite Source code
IntermediateProperties Source code
IntermediatePropertiesNoData Source code
NetProps Source code
NetPropsNoData Source code
NetRep Man page
NetRep-data Man page
NetRep-package Man page
PermutationProcedure Source code
PermutationProcedureNoData Source code
Scale Source code
`%nin%` Source code
`%sub_in%` Source code
`%sub_nin%` Source code
addGradientLegend Source code
any.disk.matrix Source code
areColors Source code
as.disk.matrix Man page
as.disk.matrix,ANY-method Man page
as.disk.matrix,disk.matrix-method Man page
as.disk.matrix,matrix-method Man page
as.matrix,disk.matrix-method Man page
attach.disk.matrix Man page Source code
checkIsMatrix Source code
checkPlotArgs Source code
combineAnalyses Man page Source code
combineAnalysesInternal Source code
common_params Man page
contingencyTable Source code
correlation.palette Source code
discovery_correlation Man page
discovery_data Man page
discovery_network Man page
disk.matrix Man page
emptyPlot Source code
example-data Man page
filterInternalProps Source code
forceLim Source code
getColFromPalette Source code
getModuleBreaks Source code
getModuleMidPoints Source code
insert.nas Source code
is.disk.matrix Man page Source code
load.bigMatrix Man page Source code
loadIntoRAM Source code
modulePreservation Man page Source code
module_labels Man page
netPropsInternal Source code
network.palette Source code
networkProperties Man page Source code
nodeOrder Man page Source code
nodeOrderInternal Source code
orderAsNumeric Source code
orderModules_param Man page
permp Source code
permutation Man page
permutationTest Man page Source code
permuted Man page
pkgReqCheck Source code
plotBar Source code
plotContribution Man page Source code
plotCorrelation Man page Source code
plotData Man page Source code
plotDegree Man page Source code
plotModule Man page Source code
plotMultiBar Source code
plotNetwork Man page Source code
plotProps Source code
plotSquareHeatmap Source code
plotSummary Man page Source code
plotTopology Man page
plotTriangleHeatmap Source code
plot_params Man page
prettyPath Source code
processInput Source code
requiredPerms Man page Source code
sampleOrder Man page Source code
sampleOrderInternal Source code
serialize.table Man page Source code
show,disk.matrix-method Man page
simplifyList Source code
simplify_param Man page
sortModuleNames Source code
test_correlation Man page
test_data Man page
test_network Man page
vCat Source code
verifyDatasetOrder Source code
NetRep documentation built on Aug. 19, 2023, 5:07 p.m.