OTUtable: North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions

Analyses of OTU tables produced by 16S sequencing, as well as example data. It contains the data and scripts used in the paper Linz, et al. (2017) "Bacterial community composition and dynamics spanning five years in freshwater bog lakes" (Manuscript submitted, preprint available at <http://biorxiv.org/content/early/2017/04/12/127035>).

Install the latest version of this package by entering the following in R:
AuthorAlexandra Linz
Date of publication2017-04-13 18:01:29 UTC
MaintainerAlexandra Linz <amlinz16@gmail.com>

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bog_subset Man page
chao1 Man page
clean_mothur_taxonomy Man page
clean_shared Man page
clean_TaxAss_taxonomy Man page
combine_otus Man page
extract_date Man page
filter_taxa Man page
grab_group Man page
make_do_matrix Man page
make_temp_matrix Man page
metadata Man page
obs_richness Man page
otu_table Man page
OTUtable Man page
OTUtable-package Man page
pielou Man page
plot_column Man page
reduce_names Man page
remove_reps Man page
rotate Man page
shannon Man page
taxonomy Man page
year_subset Man page
zscore Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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