npx_data2: NPX Data in Long format, Follow-up
In OlinkAnalyze: Facilitate Analysis of Proteomic Data from Olink
npx_data2 R Documentation
NPX Data in Long format, Follow-up
Description
Data is generated randomly to demonstrate use of functions in this package. The format is very similar to data(npx_data1). Both datasets can be used together to demonstrate the use of normalization functionality.
Usage
npx_data2
Format
In addition to standard read_NPX() columns, this dataset also contains columns:
- Subject
Subject Identifier
- Treatment
Treated or Untreated
- Site
Site indicator, 5 unique values
- Time
Baseline, Week.6 and Week.12
- Project
Project ID number
Details
A tibble with 32,384 rows and 17 columns. npx_data2 is an Olink NPX data file (tibble) in long format with 174 unique Sample ID's (including 2 repeats each of control samples: CONTROL_SAMPLE_AS 1 CONTROL_SAMPLE_AS 2). The data also contains 1104 assays (uniquely identified using OlinkID) over 2 Panels. This dataset also contain 16 bridge samples with SampleID's that are also present in data(npx_data1). These sample ID's are: A13, A29, A30, A36, A45, A46, A52, A63, A71, A73, B3, B4, B37, B45, B63, B75
OlinkAnalyze documentation built on Nov. 4, 2023, 1:07 a.m.
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| npx_data2 | R Documentation |
NPX Data in Long format, Follow-up
Description
Data is generated randomly to demonstrate use of functions in this package. The format is very similar to data(npx_data1). Both datasets can be used together to demonstrate the use of normalization functionality.
Usage
npx_data2
Format
In addition to standard read_NPX() columns, this dataset also contains columns:
- Subject
Subject Identifier
- Treatment
Treated or Untreated
- Site
Site indicator, 5 unique values
- Time
Baseline, Week.6 and Week.12
- Project
Project ID number
Details
A tibble with 32,384 rows and 17 columns. npx_data2 is an Olink NPX data file (tibble) in long format with 174 unique Sample ID's (including 2 repeats each of control samples: CONTROL_SAMPLE_AS 1 CONTROL_SAMPLE_AS 2). The data also contains 1104 assays (uniquely identified using OlinkID) over 2 Panels. This dataset also contain 16 bridge samples with SampleID's that are also present in data(npx_data1). These sample ID's are: A13, A29, A30, A36, A45, A46, A52, A63, A71, A73, B3, B4, B37, B45, B63, B75
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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