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PCMBaseCpp: Fast Likelihood Calculation for Phylogenetic Comparative Models
Provides a C++ backend for multivariate phylogenetic comparative models implemented in the R-package 'PCMBase'. Can be used in combination with 'PCMBase' to enable fast and parallel likelihood calculation. Implements the pruning likelihood calculation algorithm described in Mitov et al. (2018) <arXiv:1809.09014>. Uses the 'SPLITT' C++ library for parallel tree traversal described in Mitov and Stadler (2018) <doi:10.1111/2041-210X.13136>.
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Package details |
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| Author | Venelin Mitov [aut, cre, cph] (<a href="https://venelin.github.io">venelin.github.io</a>) |
| Maintainer | Venelin Mitov <vmitov@gmail.com> |
| License | GPL (>= 3.0) |
| Version | 0.1.9 |
| URL | https://github.com/venelin/PCMBaseCpp https://venelin.github.io |
| Package repository | View on CRAN |
| Installation |
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