benchmarkData: Data for performing a benchmark

Description Usage Format

Description

A dataset containing three triplets trees, trait-values and models to evaluate the likelihood calculation times for R and C++ implementations.

Usage

1

Format

A data frame with 4 rows and 8 variables:

tree

phylogenetic tree (phylo) with set edge.regimes member

model

MGPM model used to simulate the data in X

X

trait values

ll

log-likelihood value

modelBM

a random BM model

llBM

log-likelihood value form modelBM

modelOU

a random OU model

llOU

log-likelihood value for modelOU


PCMBaseCpp documentation built on March 23, 2020, 1:06 a.m.