Files in PCMBaseCpp

Fast Likelihood Calculation for Phylogenetic Comparative Models

MD5

NEWS.md README.md

NAMESPACE

DESCRIPTION

R/Utilities.R R/White.R R/OU.R R/MixedGaussian.R R/BenchmarkRvsCpp.R R/BM.R R/zzz.R R/DOU.R R/JOU.R R/Generic.R

src/Makevars

src/SPLITT.h

src/QuadraticPolyOU1D.h

src/QuadraticPoly.h

src/QuadraticPolyCommon.h

src/Rcpp.cpp

src/QuadraticPolyOU.h

src/QuadraticPolyBM1D.h

src/QuadraticPolyWhite.h

src/QuadraticPolyMixedGaussian1D.h

src/QuadraticPolyMixedGaussian.h

src/QuadraticPolyDOU.h

src/QuadraticPolyJOU.h

src/QuadraticPolyBM.h

src/QuadraticPoly1D.h

inst/CITATION

inst/doc/PCMBaseCpp.R

inst/doc/PCMBaseCpp.html

inst/doc/PCMBaseCpp.Rmd

build/vignette.rds

tests/testthat.R tests/testthat/test-White.R tests/testthat/test-BM.R tests/testthat/test-JOU.R

tests/testthat/testobjects.RData

tests/testthat/test-DOU.R tests/testthat/test-BenchmarkRvsCpp.R tests/testthat/test-OU.R tests/testthat/test-SingularV.R tests/testthat/test-MixedGaussian.R

vignettes/REFERENCES.bib

vignettes/REFERENCES-R.bib

vignettes/PCMBaseCpp.Rmd

data/benchmarkResultsNoTransform.rda

data/benchmarkResults.rda

data/benchmarkData.rda

man/MiniBenchmarkRvsCpp.Rd man/benchmarkResults.Rd man/PCMInfoCpp.Rd man/PCMTreePreorderCpp.Rd man/PCMParamGetFullVector.Rd man/BenchmarkRvsCpp.Rd man/benchmarkResultsNoTransform.Rd man/PCListInt.Rd man/benchmarkData.Rd man/PCMBaseCppIsADevRelease.Rd

PCMBaseCpp documentation built on June 8, 2025, 11:19 a.m.