Fast Likelihood Calculation for Phylogenetic Comparative Models

benchmarkData | Data for performing a benchmark |

benchmarkResults | Results from running a performance benchmark on a personal... |

benchmarkResultsNoTransform | Results from running a performance benchmark on a personal... |

BenchmarkRvsCpp | A log-likelihood calculation time comparison for different... |

MiniBenchmarkRvsCpp | Evaluate the likelihood calculation times for example trees... |

PCListInt | Converts the logical matrix pc into a list of vectors... |

PCMBaseCppIsADevRelease | Check if the PCMBaseCpp version correpsonds to a dev release |

PCMInfoCpp | A S3 generic for creating C++ backend objects given a model,... |

PCMParamGetFullVector | Get a vector with all model parameters unrolled |

PCMTreePreorderCpp | Fast preorder of the edges in a tree |

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