PLSbiplot1: The Partial Least Squares (PLS) Biplot

Principal Component Analysis (PCA) biplots, Covariance monoplots and biplots, Partial Least Squares (PLS) biplots, Partial Least Squares for Generalized Linear Model (PLS-GLM) biplots, Sparse Partial Least Squares (SPLS) biplots and Sparse Partial Least Squares for Generalized Linear Model (SPLS-GLM) biplots.

Author
Opeoluwa F. Oyedele [aut, cre], Sugnet Gardner-Lubbe [aut]
Date of publication
2014-11-06 01:34:43
Maintainer
Opeoluwa F. Oyedele <OpeoluwaOyedele@gmail.com>
License
GPL-2
Version
0.1
URLs

View on CRAN

Man pages

cov.biplot
The covariance biplot
cov.monoplot
The covariance monoplot
Mag.Bmat.plot
Magnitude of the Partial Least Squares Regression (PLSR)...
mod.KernelPLS_L
The Kernel algorithm for few(er) variables but large samples...
mod.KernelPLS_R
The Kernel algorithm for few(er) samples but large variables...
mod.MMLR
Multivariate Multiple Linear Regression (MMLR)
mod.NIPALS
The Nonlinear Iterative PArtial Least Squares (NIPALS)...
mod.PCA
Principal Component Analysis (PCA)
mod.PCR
Principal Component Regression (PCR)
mod.SIMPLS
The Statistical Inspired Modification to Partial Least...
mod.SPLS
Sparse Partial Least Squares (SPLS) algorithm
mod.VIP
The Variable Importance in the Projection (VIP) values
opt.penalty.values
Choosing a value for penalty parameters lambdaX and lambdaY...
PCA.biplot
The Principal Component Analysis (PCA) biplot
PCA.biplot_no.SN
The Principal Component Analysis (PCA) biplot with the labels...
PLS.binomial.GLM
Partial Least Squares-Generalized Linear Model (PLS-GLM)...
PLS.biplot
The Partial Least Squares (PLS) biplot
PLS.biplot.area
The Partial Least Squares (PLS) biplot with triangles for...
PLS.biplot_no_labels
The Partial Least Squares (PLS) biplot with the labels of the...
PLS.biplot_no.SN
The Partial Least Squares (PLS) biplot with no sample points...
PLS.GLM
Partial Least Squares-Generalized Linear Model (PLS-GLM)...
PLS.GLM.biplot
The Partial Least Squares (PLS) biplot for Generalized Linear...
PLS.GLM.biplot_bvec
A zoomed-in display of the coefficient points in the Partial...
PLS.GLM.biplot_no_labels
The Partial Least Squares (PLS) biplot for Generalized Linear...
PLS.GLM.biplot_no.SN
The Partial Least Squares (PLS) biplot for Generalized Linear...
PLS.GLM.biplot_SIMPLS
The Partial Least Squares (PLS) biplot for Generalized Linear...
PLS.GLM.biplot_SIMPLS_no.SN
The Partial Least Squares (PLS) biplot for Generalized Linear...
PLS.GLM_SIMPLS
Partial Least Squares-Generalized Linear Model (PLS-GLM)...
SPLS.binomial.GLM
Sparse Partial Least Squares-Generalized Linear Model...
SPLS.biplot
The Partial Least Squares (PLS) biplot for Sparse Partial...
SPLS.biplot_Bmat
A zoomed-in display of the coefficient points in the Partial...
SPLS.biplot_no_ax.labels
The Partial Least Squares (PLS) biplot for Sparse Partial...
SPLS.biplot_no_labels
The Partial Least Squares (PLS) biplot for Sparse Partial...
SPLS.GLM
Sparse Partial Least Squares-Generalized Linear Model...
SPLS.GLM.biplot
The Partial Least Squares (PLS) biplot for Sparse Partial...
SPLS.GLM.biplot_bvec
A zoomed-in display of the coefficient points in the Partial...
SPLS.GLM.biplot_no.SN
The Partial Least Squares (PLS) biplot for Sparse Partial...

Files in this package

PLSbiplot1
PLSbiplot1/NAMESPACE
PLSbiplot1/R
PLSbiplot1/R/AllFunctions.R
PLSbiplot1/MD5
PLSbiplot1/DESCRIPTION
PLSbiplot1/man
PLSbiplot1/man/PCA.biplot_no.SN.Rd
PLSbiplot1/man/SPLS.GLM.biplot_no.SN.Rd
PLSbiplot1/man/mod.MMLR.Rd
PLSbiplot1/man/PLS.biplot_no_labels.Rd
PLSbiplot1/man/PLS.GLM.biplot_bvec.Rd
PLSbiplot1/man/SPLS.biplot_no_ax.labels.Rd
PLSbiplot1/man/PLS.binomial.GLM.Rd
PLSbiplot1/man/mod.NIPALS.Rd
PLSbiplot1/man/mod.PCR.Rd
PLSbiplot1/man/SPLS.biplot_no_labels.Rd
PLSbiplot1/man/PCA.biplot.Rd
PLSbiplot1/man/mod.KernelPLS_L.Rd
PLSbiplot1/man/SPLS.binomial.GLM.Rd
PLSbiplot1/man/PLS.biplot_no.SN.Rd
PLSbiplot1/man/mod.KernelPLS_R.Rd
PLSbiplot1/man/opt.penalty.values.Rd
PLSbiplot1/man/SPLS.GLM.biplot.Rd
PLSbiplot1/man/mod.SIMPLS.Rd
PLSbiplot1/man/PLS.GLM.biplot_no_labels.Rd
PLSbiplot1/man/mod.PCA.Rd
PLSbiplot1/man/SPLS.GLM.Rd
PLSbiplot1/man/PLS.GLM_SIMPLS.Rd
PLSbiplot1/man/SPLS.biplot_Bmat.Rd
PLSbiplot1/man/PLS.GLM.Rd
PLSbiplot1/man/PLS.biplot.Rd
PLSbiplot1/man/mod.VIP.Rd
PLSbiplot1/man/Mag.Bmat.plot.Rd
PLSbiplot1/man/SPLS.biplot.Rd
PLSbiplot1/man/mod.SPLS.Rd
PLSbiplot1/man/PLS.GLM.biplot_SIMPLS.Rd
PLSbiplot1/man/cov.biplot.Rd
PLSbiplot1/man/PLS.GLM.biplot_SIMPLS_no.SN.Rd
PLSbiplot1/man/PLS.GLM.biplot.Rd
PLSbiplot1/man/PLS.GLM.biplot_no.SN.Rd
PLSbiplot1/man/PLS.biplot.area.Rd
PLSbiplot1/man/SPLS.GLM.biplot_bvec.Rd
PLSbiplot1/man/cov.monoplot.Rd