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Quartet: Comparison of Phylogenetic Trees Using Quartet and Split Measures
Calculates the number of four-taxon subtrees consistent with a pair of cladograms, calculating the symmetric quartet distance of Bandelt & Dress (1986), Reconstructing the shape of a tree from observed dissimilarity data, Advances in Applied Mathematics, 7, 309-343 <doi:10.1016/0196-8858(86)90038-2>, and using the tqDist algorithm of Sand et al. (2014), tqDist: a library for computing the quartet and triplet distances between binary or general trees, Bioinformatics, 30, 2079–2080 <doi:10.1093/bioinformatics/btu157> for pairs of binary trees.
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Package details |
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| Author | Martin R. Smith [aut, cre, cph] (<https://orcid.org/0000-0001-5660-1727>), Andreas Sand [ant], Gerth Stølting Brodal [ant], Rolf Fagerberg [ant], Thomas Mailund [ant], Christian N. S. Pedersen [ant], Jens Johansen [ant], Morten K. Holt [ant] |
| Maintainer | Martin R. Smith <martin.smith@durham.ac.uk> |
| License | GPL (>= 2) |
| Version | 1.2.5 |
| URL | https://ms609.github.io/Quartet/ https://github.com/ms609/Quartet/ |
| Package repository | View on CRAN |
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