meta: Sample Metadata for ITS1/ITS2

In RAM: R for Amplicon-Sequencing-Based Microbial-Ecology

Description

This data frame provides sample metadata for the ITS1/ITS2 data included in this package.

Usage

data(meta)

Format

A data frame with 16 observations on the following 10 variables.

Sample

a factor with levels Sample1 Sample2 Sample3 Sample4 Sample5 Sample6 Sample7 Sample8

City

a factor with levels City1 City2

Crop

a factor with levels Crop1 Crop2

Plots

a factor with levels 1 2

Harvestmethod

a factor with levels Method1 Method2

Harvestdate

a Date

Ergosterol_ppm

a numeric vector

Province

a character vector

Latitude

a numeric vector

Longitude

a numeric vector

Source

Wen Chen and Joshua Simpson.

Examples

data(meta)
str(meta)

Example output

Loading required package: vegan
Loading required package: permute
Loading required package: lattice
This is vegan 2.4-4
Loading required package: ggplot2
sh: 1: cannot create /dev/null: Permission denied
sh: 1: cannot create /dev/null: Permission denied
'data.frame':	16 obs. of  10 variables:
 $ Sample        : Factor w/ 8 levels "Sample1","Sample2",..: 1 2 3 4 5 6 7 8 1 2 ...
 $ City          : Factor w/ 2 levels "City1","City2": 1 1 1 1 2 2 2 2 1 1 ...
 $ Crop          : Factor w/ 2 levels "Crop1","Crop2": 1 1 1 1 1 1 1 1 2 2 ...
 $ Plots         : Factor w/ 2 levels "1","2": 2 2 2 2 2 2 2 2 1 1 ...
 $ Harvestmethod : Factor w/ 2 levels "Method1","Method2": 1 2 1 2 1 2 1 2 1 2 ...
 $ Harvestdate   : Date, format: "2014-08-13" "2014-08-13" ...
 $ Ergosterol_ppm: num  9.1 9.16 10.36 11.6 7.78 ...
 $ Province      : chr  "ON" "ON" "ON" "ON" ...
 $ Latitude      : num  45.4 45.4 45.4 45.4 45.5 ...
 $ Longitude     : num  -75.7 -75.7 -75.7 -75.7 -73.6 ...

RAM documentation built on May 2, 2019, 3:04 p.m.