list_all: Listing unique alleles
In RClone: Partially Clonal Populations Analysis

list_all_tab returns a table with loci in column and unique alleles in row.

1	list_all_tab(data1, haploid = FALSE, vecpop = NULL)

`data1`	a `Rclone` table, with one allele per column.
`haploid`	logical, option, `haploid` indicates the ploidy level of `data1`.
`vecpop`	vector, option, `vecpop` indicates the population name of each unit of `data1`, if `data1` contains several populations. If `data1` contains only one population, leave `vecpop = NULL`.

a table (one population) or a list of tables (several populations) with the unique alleles per locus.

Creator/Author: Diane Bailleul <diane.bailleul.pro@gmail.com>
Author: Sophie Arnaud-Haond <sophie.arnaud@ifremer.fr>
Contributor: Solenn Stoeckel

The R implementation of RClone was written by Diane Bailleul.

The design was inspired by GenClone program described in Arnaud-Haond & Belkhir (2007).

data(posidonia)

list_all_obj(posidonia, haploid = FALSE)
list_all_tab(posidonia, haploid = FALSE)
corresp_loci(posidonia, haploid = FALSE)

RClone documentation built on May 15, 2021, 5:07 p.m.

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