Description Usage Arguments Value Note Author(s) References See Also Examples
pgen
and pgen_Fis
compute the probability of a genotype
under the Hardy-Weinberg equilibrium assumption (with or without taking account
of departures from H-W equilibrium).
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data1 |
a |
haploid |
logical, option, |
vecpop |
vector, option, |
genet |
option, if |
RR |
option, if |
a table (one population) or a list of tables (several populations) with pgen
computed for each genotype.
We strongly recommand to use RR = TRUE
option to compute allelic
frequencies for clonal data.
Otherwise, we let the options to work with frequencies at genet level
(genet = TRUE
) or ramet level (RR = FALSE
and
genet = FALSE
).
Creator/Author: Diane Bailleul <diane.bailleul.pro@gmail.com>
Author: Sophie Arnaud-Haond <sophie.arnaud@ifremer.fr>
Contributor: Solenn Stoeckel
The R implementation of RClone
was written by Diane Bailleul.
The design was inspired by GenClone program described in Arnaud-Haond & Belkhir (2007).
Arnaud-Haond et al., 2007, Standardizing methods to address clonality in population studies.
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