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#' @title Export Arms
#'
#' @description Export Arms of a REDCap project
#'
#' @param redcap_uri The URI (uniform resource identifier) of the REDCap
#' project. Required.
#' @param token The user-specific string that serves as the password for a
#' project. Required.
#'
#' @param verbose A boolean value indicating if `message`s should be printed
#' to the R console during the operation. The verbose output might contain
#' sensitive information (*e.g.* PHI), so turn this off if the output might
#' be visible somewhere public. Optional.
#' @param config_options A list of options to pass to `POST` method in the
#' `httr` package. See the details in [redcap_read_oneshot()]. Optional.
#'
#' @return Currently, a list is returned with the following elements:
#' * `has_arms`: a `logical` value indicating if the REDCap project has
#' arms (*i.e.*, "TRUE") or is a classic non-longitudinal project
#' (*i.e.*, "FALSE").
#' * `data`: a [`tibble`] with one row per arm. The columns are
#' `arm_number` (an integer) and `arm_name` (a human-friendly string).
#' * `success`: A boolean value indicating if the operation was apparently
#' successful.
#' * `status_code`: The
#' [http status code](https://en.wikipedia.org/wiki/List_of_HTTP_status_codes)
#' of the operation.
#' * `outcome_message`: A human readable string indicating the operation's
#' outcome.
#' * `elapsed_seconds`: The duration of the function.
#' * `raw_text`: If an operation is NOT successful, the text returned by
#' REDCap. If an operation is successful, the `raw_text` is returned as an
#' empty string to save RAM.
#'
#' @author Will Beasley
#'
#' @references The official documentation can be found on the 'API Help Page'
#' and 'API Examples' pages on the REDCap wiki (*i.e.*,
#' https://community.projectredcap.org/articles/456/api-documentation.html and
#' https://community.projectredcap.org/articles/462/api-examples.html).
#' If you do not have an account for the wiki, please ask your campus REDCap
#' administrator to send you the static material.
#'
#' @examples
#' \dontrun{
#' uri <- "https://bbmc.ouhsc.edu/redcap/api/"
#'
#' # Query a classic project with 3 arms
#' token_1 <- "CDF9F3767E413FDBAA31D92E9F36730A"
#' result_1 <- REDCapR::redcap_arm_export(redcap_uri=uri, token=token_1)
#' result_1$has_arms
#' result_1$data
#'
#' # Query a classic project without arms
#' token_2 <- "D70F9ACD1EDD6F151C6EA78683944E98"
#' result_2 <- REDCapR::redcap_arm_export(redcap_uri=uri, token=token_2)
#' result_2$has_arms
#' result_2$data
#' }
#' @importFrom rlang .data
#' @export
redcap_arm_export <- function(
redcap_uri,
token,
verbose = TRUE,
config_options = NULL
) {
checkmate::assert_character(redcap_uri, any.missing=FALSE, len=1, pattern="^.{1,}$")
checkmate::assert_character(token , any.missing=FALSE, len=1, pattern="^.{1,}$")
token <- sanitize_token(token)
verbose <- verbose_prepare(verbose)
post_body <-
list(
token = token,
content = "arm",
format = "csv"
)
try(
{
# This is the important line that communicates with the REDCap server.
kernel <- kernel_api(redcap_uri, post_body, config_options)
},
# Don't print the warning in the try block. Print it below,
# where it's under the control of the caller.
silent = TRUE
)
if (exists("kernel")) {
if (kernel$success) {
has_arms <- TRUE
outcome_message <- sprintf(
paste(
"The list of arms was retrieved from the REDCap project in %0.1f seconds.",
"The http status code was %i."
),
kernel$elapsed_seconds,
kernel$status_code
)
col_types <- readr::cols(
arm_num = readr::col_integer(),
name = readr::col_character()
)
d <-
readr::read_csv(I(kernel$raw_text), col_types = col_types) %>%
dplyr::select(
arm_number = .data$arm_num,
arm_name = .data$name
)
#If an operation is successful, the `raw_text` is no longer returned to save RAM. The content is not really necessary with httr's status message exposed.
kernel$raw_text <- ""
} else if (kernel$raw_text == "ERROR: You cannot export arms for classic projects") {
has_arms <- FALSE
outcome_message <- sprintf(
paste(
"A 'classic' REDCap project has no arms. Retrieved in %0.1f seconds.",
"The http status code was %i."
),
kernel$elapsed_seconds,
kernel$status_code
)
d <- tibble::tibble(
arm_number = integer(0),
arm_name = character(0)
)
} else {
error_message <- sprintf(
paste(
"The REDCapR arm export failed.",
"The http status code was %i.",
"The error message was: '%s'."
),
kernel$status_code,
kernel$raw_text
)
stop(error_message)
}
} else {
# nocov start
error_message <- sprintf("The REDCapR arm export failed. The error message was:\n%s.", kernel$raw_text)
stop(error_message)
# nocov end
}
if (verbose)
message(outcome_message)
list(
has_arms = has_arms,
data = d,
success = kernel$success,
status_code = kernel$status_code,
outcome_message = outcome_message,
elapsed_seconds = kernel$elapsed_seconds,
raw_text = kernel$raw_text
)
}
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