Files in REIDS
Random Effects for the Identification of Differential Splicing
MD5
DESCRIPTION
NAMESPACE
inst/doc/ExonAndTranscriptAnnotations.py
inst/doc/TC1500264_Pivot.csv
inst/doc/FIRMAScores.pbs
inst/doc/REIDSJunctionAssesment_HPCVersion.pbs
inst/doc/combineProbeInfo.pl
inst/doc/ID_Name_TC.py
inst/doc/REIDS_Vignette.pdf
inst/doc/REIDS_Vignette.Rnw
inst/doc/REIDSJunctionAssesment_HPCVersion.R
inst/doc/JunctionAssociations.py
inst/doc/DataProcessing.pbs
inst/doc/CreateOutput.pbs
inst/doc/REMAP_ExtractInfo.py
inst/doc/Line_Indexer_PivotFile.py
inst/doc/REIDS_Vignette.R
inst/doc/TC1500264_TC_Gene_SplitFile.txt
inst/doc/TC1500264_REMAP.txt
inst/doc/TC1500264_REMAP_Indices.txt
inst/doc/SpliceIndex.pbs
inst/doc/Line_Indexer_PivotFile.pbs
inst/doc/REIDSFunction_HPCVersion.R
inst/doc/addGeneId_2.pl
inst/doc/REIDSFunction_HPCVersion.pbs
inst/doc/README.txt
inst/doc/ASExons.pbs
inst/doc/REMAP_ExtractInfo.pbs
inst/doc/TC1500264_LineIndex.csv
vignettes/FolderStructure.png
vignettes/REIDS_Vignette.Rnw
vignettes/Figure11.jpg
vignettes/Transcripts_PSR150.pdf
vignettes/asa.bst
vignettes/Package_1.pdf
vignettes/REIDS_Biblio.bib
R/data.R
R/REIDS.R
R/Functions.R
man/iniREIDS.Rd
man/REIDS_Analysis.Rd
man/graph_info.Rd
man/REIDSFunction_HPCVersion.Rd
man/REMAP_SplitProbeSets.Rd
man/reidsfunction_genebygene.Rd
man/REIDS.Rd
man/xynodes.Rd
man/GetIntensities.Rd
man/above_below.Rd
man/ExonTesting.Rd
man/ASExons.Rd
man/node_coords.Rd
man/REIDSmodel_intern.Rd
man/ExpressionLevelPlot.Rd
man/AnnotateGeneSymbol.Rd
man/REIDS_JunctionAssesment.Rd
man/arcplot.Rd
man/min_max_margin.Rd
man/ExampleFirmaOutput.Rd
man/TC12000010_positions.Rd
man/TC12000010.Rd
man/TC12000010_REIDS_Output.Rd
man/TC12000010_GeneLevel.Rd
man/TC1500264.Rd
man/REIDSJunctionAssessment_HPCVersion.Rd
man/REIDSFunction.Rd
man/TC12000010_ExonLevel.Rd
man/PivotTransformData.Rd
man/AnnotateGenes.Rd
man/REIDS_IsoformAssesment.Rd
man/arc_radius_locs.Rd
man/CreateOutput.Rd
man/TC12000010_transcript.clusters.Rd
man/DataProcessing.Rd
man/SpliceIndex.Rd
man/trim.Rd
man/FIRMAScores.Rd
man/TranscriptsPlot.Rd
man/JunInfo.Rd
build/vignette.rds
data/TC12000010_ExonLevel.RData
data/TC12000010_transcript.clusters.RData
data/TC12000010_GeneLevel.RData
data/TC12000010.RData
data/TC12000010_REIDS_Output.RData
data/TC1500264.RData
data/TC12000010_positions.RData
data/datalist
data/ExampleFirmaOutput.RData
