ExpressionLevelPlot: "ExpressionLevelPlot"

In REIDS: Random Effects for the Identification of Differential Splicing

Description

The ExpressionLevelPlot produces a plot of the expression levels of a specific exon and its corresponding gene.

Usage

ExpressionLevelPlot(GeneID = NULL, ExonID = NULL, Data,
  GeneLevelData = NULL, ExonLevelData = NULL, Groups, ylabel = NULL,
  title = "")

Arguments

GeneID	The gene ID of the gene of interest.
ExonID	The exon ID of the exon of interest.
Data	The processed data as returned by DataProcessing. This is were the observed probe intensities will be retrieved.
GeneLevelData	The gene level summarized data to retrieve the gene level values.
ExonLevelData	The exon level summarized data to retrieve the exon level values.
Groups	The groups of interest in the data.
ylabel	The label for the y-axis.
title	A title for the plot.

Examples

## Not run: 
data(TC12000010)
data(TC12000010_ExonLevel)
data(TC12000010_GeneLevel)
ExpressionLevelPlot(GeneID="TC12000010",ExonID="PSR12000150",
Data=TC12000010,GeneLevelData=TC12000010_GeneLevel,ExonLevelData
=TC12000010_ExonLevel,Groups=list(c(1:9),c(10:18)),ylabel="",
title="PSR12000150")

## End(Not run)

REIDS documentation built on May 2, 2019, 6:42 a.m.