above_below | Above or Below |
AnnotateGenes | "AnnotateGenes" |
AnnotateGeneSymbol | "AnnotateGeneSymbol" |
arcplot | Arc Diagram Plot |
arc_radius_locs | Arc Radius Locations |
ASExons | "ASExons" |
CreateOutput | "CreateOutput" |
DataProcessing | DataProcessing |
ExampleFirmaOutput | Example data set for FIRMA |
ExonTesting | "ExonTesting" |
ExpressionLevelPlot | "ExpressionLevelPlot" |
FIRMAScores | "FIRMAScores" |
GetIntensities | "GetIntensities" |
graph_info | Graph Information |
iniREIDS | "iniREIDS" |
JunInfo | JunInfo |
min_max_margin | Minimum and Maximum Margin Limits |
node_coords | Node Coordinates |
PivotTransformData | "PivotTransformation" |
REIDS | Random Effects for the Identification of Differential... |
REIDS_Analysis | REIDS_Analysis |
REIDSFunction | "REIDSFunction" |
reidsfunction_genebygene | "reidsfunction_genebygene" |
REIDSFunction_HPCVersion | "REIDS_HPCVersion" |
REIDS_IsoformAssesment | REIDS_IsoformAssesment |
REIDS_JunctionAssesment | REIDS_JunctionAssessment |
REIDSJunctionAssessment_HPCVersion | REIDSJunctionAssessment_HPCVersion |
REIDSmodel_intern | "REIDSmodel_intern" |
REMAP_SplitProbeSets | "REMAP_SplitProbeSets" |
SpliceIndex | "SpliceIndex" |
TC12000010 | Example data set |
TC12000010_ExonLevel | Exon level data |
TC12000010_GeneLevel | Gene level data |
TC12000010_positions | Positions |
TC12000010_REIDS_Output | REIDS Output |
TC12000010_transcript.clusters | Transcript Clusters |
TC1500264 | Example data set |
TranscriptsPlot | "TranscriptsPlot " |
trim | "trim" |
xynodes | X or Y coordinates of node locations |
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