Description Usage Arguments Value Author(s) See Also Examples
createAssembly
create assemblies for their use as parameter of genomemap_rjs
or manhattan_rjs
.
1 | createAssembly(name, size)
|
name |
a vector with the chomosome or scaffold names. |
size |
a vector with the chomosome or scaffold sizes. |
a data frame in BED format to be used as an assembly in genomemap_rjs
or manhattan_rjs
.
David Barrios and Carlos Prieto. Bioinformatics Service of Nucleus, University of Salamanca. See https://bioinfo.usal.es/
The ‘RJSplot’ Website: https://rjsplot.usal.es
1 2 3 4 5 | ## Creates a fake genome assembly for its posterior use as parameter of genomemap or manhattan plot
## Live examples and full tutorial on https://rjsplot.usal.es
## Generate a test assembly with three scaffolds
assembly <- createAssembly(c("scaffold1","scaffold2","scaffold3"), c(1000000,800000,650000))
|
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