Files in RMark
R Code for Mark Analysis
MD5
NEWS
NAMESPACE
DESCRIPTION
R/var.components.R
R/var.components.reml.r
R/fill.covariates.R
R/run.mark.model.R
R/model.average.marklist.R
R/export.chdata.R
R/setup.parameters.R
R/make.design.data.R
R/summary.ch.r
R/create.mark.mcmc.R
R/read.mark.binary.R
R/make.mark.model.R
R/merge.mark.r
R/mark.wrapper.parallel.r
R/extract.mark.output.R
R/model.average.list.r
R/summary.mark.R
R/valid.parameters.R
R/covariate.predictions.r
R/print.mark.R
R/merge.design.covariates.r
R/get.real.R
R/popan.r
R/splitCH.r
R/rerun.mark.R
R/import.chdata.R
R/RMark-package.R
R/convert.link.to.real.r
R/mata.wald.r
R/PIMS.R
R/export.model.r
R/compute.design.data.R
R/setup.model.R
R/predict_real.R
R/deltamethod.r
R/process.data.R
R/print.summary.mark.R
R/adjust.chat.R
R/compute.real.R
R/deriv.inverse.link.R
R/utility.r
R/compute.link.R
R/collect.models.R
R/run.models.R
R/get.link.R
R/export.MARK.r
R/compute.links.from.reals.R
R/mark.R
R/release.gof.R
R/create.model.list.R
R/add.design.data.R
R/convert.inp.r
R/zzz.R
R/inverse.link.R
R/process.ch.R
R/store.r
R/cleanup.R
R/remove.mark.r
R/adjust.parameter.count.R
R/model.average.R
R/find.covariates.R
R/mark.wrapper.R
R/model.table.R
R/TransitionMatrix.R
R/model.average.default.r
R/collect.model.names.R
R/make.time.factor.r
inst/parameters.txt
inst/DerivedPar.txt
inst/MarkModels.pdf
inst/CITATION
inst/README.txt
inst/models.txt
inst/extdata/indcov2.inp
inst/extdata/plover_mark.inp
inst/extdata/mstrata.txt
inst/extdata/interval.inp
inst/extdata/donovan.7.inp
inst/extdata/example.data.txt
inst/extdata/multi_group.inp
inst/extdata/age-transients-full.inp
inst/extdata/capsid.inp
inst/extdata/skagit.txt
inst/extdata/young.inp
inst/extdata/m_age.inp
inst/extdata/age.inp
inst/extdata/robust.inp
inst/extdata/killdeer.inp
inst/extdata/aa.inp
inst/extdata/rd_complex1.inp
inst/extdata/deer.inp
inst/extdata/ms_gof.inp
inst/extdata/brownie.inp
inst/extdata/ms_rdsimple1.inp
inst/extdata/effect_size.inp
inst/extdata/island.inp
inst/extdata/edwardsandeberhardt.txt
inst/extdata/donovan.8.inp
inst/extdata/salamander.inp
inst/extdata/mixed_closed1.inp
inst/extdata/ed.inp
inst/extdata/age_ya.inp
inst/extdata/huggins.inp
inst/extdata/killdeer.txt
inst/extdata/pass3mstrata5.inp
inst/extdata/transient.inp
inst/extdata/dipper.txt
inst/extdata/simple_closed1.inp
inst/extdata/mssurv.inp
inst/extdata/clogit_demo.inp
inst/extdata/robust.txt
inst/extdata/ms_cjs.inp
inst/extdata/linear.inp
inst/extdata/edwardsandeberhardt.inp
inst/extdata/chase.inp
inst/extdata/RDMultScalOcc.sampledata.csv
inst/extdata/ms_directional.inp
inst/extdata/rdsalamander.inp
inst/extdata/yngadt.inp
inst/extdata/f_age.inp
inst/extdata/indcov1.inp
inst/extdata/adult.inp
inst/extdata/weta.txt
inst/extdata/cjs3grp.inp
inst/extdata/effect_size3.inp
inst/extdata/dipper.inp
inst/extdata/nicholsmsoccupancy.inp
inst/extdata/blackduck.txt
inst/extdata/recruit-ms.inp
inst/extdata/blckduck.inp
inst/extdata/mallard.txt
inst/extdata/staggered.inp
inst/extdata/ld1.inp
inst/extdata/rd_simple1.inp
inst/extdata/mallardnestexample.inp
inst/extdata/ed_males.inp
inst/extdata/brownadt.inp
data/Donovan.8.rda
data/deer.rda
data/dipper.rda
data/crdms.rda
data/Density.r
data/NSpeciesOcc.rda
data/example.data.rda
data/LASP.rda
data/edwards.eberhardt.rda
data/RDSalamander.rda
data/PoissonMR.rda
data/killdeer.rda
data/Poisson_twoMR.rda
data/Density.txt
data/NicholsMSOccupancy.rda
data/robust.rda
data/Donovan.7.rda
data/LogitNormalMR.rda
data/IELogitNormalMR.rda
data/Paradise_shelduck.rda
data/RDOccupancy.rda
data/mstrata.rda
data/wwdo.09.rda
data/brownie.rda
data/salamander.rda
data/mallard.rda
data/weta.rda
data/Blackduck.rda
data/wwdo.10.rda
man/weta.Rd
man/store.Rd
man/mata.wald.Rd
man/Poisson_twoMR.Rd
man/covariate.predictions.Rd
man/LogitNormalMR.Rd
man/mark.Rd
man/collect.model.names.Rd
man/RDMultScalOcc.Rd
man/valid.parameters.Rd
man/import.chdata.Rd
man/compute.design.data.Rd
man/Donovan.7.Rd
man/Burnham.Rd
man/print.mark.Rd
man/process.ch.Rd
man/collect.models.Rd
man/model.average.list.Rd
man/strip.comments.Rd
man/export.MARK.Rd
man/predict_real.Rd
man/MStruncate.Rd
man/compute.links.from.reals.Rd
man/deriv_inverse.link.Rd
man/extract.mark.output.Rd
man/summary_ch.Rd
man/popan.derived.Rd
man/skagit.Rd
man/run.models.Rd
man/killdeer.Rd
man/cleanup.Rd
man/RDOccupancy.Rd
man/deer.Rd
man/convert.link.to.real.Rd
man/make.time.factor.Rd
man/PoissonMR.Rd
man/release.gof.Rd
man/edwards.eberhardt.Rd
man/Whatsnew.Rd
man/splitCH.Rd
man/mallard.Rd
man/run.mark.model.Rd
man/IELogitNormalMR.Rd
man/mark.wrapper.Rd
man/mark.wrapper.parallel.Rd
man/setup.parameters.Rd
man/print.marklist.Rd
man/brownie.Rd
man/convert.inp.Rd
man/remove.mark.Rd
man/make.mark.model.Rd
man/mstrata.Rd
man/deltamethod.special.Rd
man/crdms.Rd
man/load.model.Rd
man/wwdo.popan.Rd
man/TransitionMatrix.Rd
man/adjust.value.Rd
man/robust.Rd
man/create.model.list.Rd
man/RDSalamander.Rd
man/compute.link.Rd
man/make.design.data.Rd
man/Blackduck.Rd
man/process.data.Rd
man/get.link.Rd
man/find.covariates.Rd
man/model.average.marklist.Rd
man/model.table.Rd
man/fill.covariates.Rd
man/readMarkVcv.Rd
man/adjust.parameter.count.Rd
man/Donovan.8.Rd
man/NSpeciesOcc.Rd
man/summary.mark.Rd
man/var.components.Rd
man/get.real.Rd
man/rerun.mark.Rd
man/compute.real.Rd
man/export.chdata.Rd
man/var.components.reml.Rd
man/PIMS.Rd
man/print.summary.mark.Rd
man/example.data.Rd
man/create.mark.mcmc.Rd
man/coef.mark.Rd
man/Paradise_shelduck.Rd
man/merge.mark.Rd
man/merge_design.covariates.Rd
man/ABeginnersGuide.Rd
man/export.model.Rd
man/model.average.Rd
man/MS_popan.Rd
man/setup.model.Rd
man/extract.indices.Rd
man/inverse.link.Rd
man/salamander.Rd
man/larksparrow.Rd
man/NicholsMSOccupancy.Rd
man/add.design.data.Rd
man/Density.Rd
man/dipper.Rd
