loopLength: internal function that determines the length of a loop
In RRNA: Secondary Structure Plotting for RNA
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Used by RNAPlot to get the length of a loop
Usage
1
loopLength(input, start)
Arguments
input
CT file
makeCt("((((...))))","AAAACCCUUUU")
start
Position of the first nucleotide in the the loop
Value
Retuns a list contianing the output and stems
Author(s)
JP Bida
Examples
1
2
ct=makeCt("((((...((((..))))..((((...)))).))))","AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")
out=loopLength(ct,4)
Example output
RRNA documentation built on May 2, 2019, 1:06 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Used by RNAPlot to get the length of a loop
Usage
1 | loopLength(input, start)
|
Arguments
input |
CT file
|
start |
Position of the first nucleotide in the the loop |
Value
Retuns a list contianing the output and stems
Author(s)
JP Bida
Examples
1 2 | ct=makeCt("((((...((((..))))..((((...)))).))))","AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA")
out=loopLength(ct,4)
|
Example output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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