API for RVA
RNAseq Visualization Automation
| Global functions | |
|---|---|
| Sample_disease_gene_set | Man page |
| Sample_summary_statistics_table | Man page |
| Sample_summary_statistics_table1 | Man page |
| c2BroadSets | Man page |
| cal.pathway.scores | Man page Source code |
| calc.cfb | Man page Source code |
| count_table | Man page |
| dlPathwaysDB | Man page Source code |
| get.cpm.colors | Man page Source code |
| get.cutoff.df | Man page |
| get.cutoff.ggplot | Man page |
| make.cutoff.plotly | Man page |
| multiPlot | Man page Source code |
| nullreturn | Man page Source code |
| plot_cutoff | Man page Source code |
| plot_cutoff_single | Man page |
| plot_gene | Man page Source code |
| plot_heatmap.cfb | Man page Source code |
| plot_heatmap.cpm | Man page Source code |
| plot_heatmap.expr | Man page Source code |
| plot_pathway | Man page Source code |
| plot_qq | Man page Source code |
| plot_volcano | Man page Source code |
| prettyGraphs | Man page Source code |
| produce.cutoff.message | Man page |
| produce.cutoff.warning | Man page |
| reformat.ensembl | Man page Source code Source code |
| sample_annotation | Man page |
| sample_count_cpm | Man page |
| secondCutoffErr | Man page Source code |
| transform.geneid | Man page Source code Source code |
| validate.FC | Man page Source code |
| validate.annot | Man page Source code |
| validate.baseline | Man page Source code |
| validate.col.types | Man page Source code |
| validate.comp.names | Man page Source code |
| validate.data | Man page Source code |
| validate.data.annot | Man page Source code |
| validate.flag | Man page Source code |
| validate.geneid.flag | Source code |
| validate.genes.present | Man page Source code |
| validate.geneset | Man page Source code |
| validate.numeric | Man page Source code |
| validate.pathways.db | Man page Source code |
| validate.pval.range | Man page Source code |
| validate.pvalflag | Man page Source code |
| validate.pvals | Man page Source code |
| validate.signif | Source code |
| validate.single.table.isnotlist | Man page Source code |
| validate.stats | Man page Source code |
| validate.stats.cols | Man page Source code |
| wpA2020 | Man page |
