Files in RevGadgets
Visualization and Post-Processing of 'RevBayes' Analyses

MD5

NAMESPACE

DESCRIPTION

R/dropTip.R R/processBranchData.R R/plotPopSizes.R R/plotAncStatesPie.R R/densiTreeWithBranchData.R R/plotFBDTree.R R/processPopSizes.R R/processSSE.R R/setMRFGlobalScaleHyperpriorNShifts.R R/readTrees.R R/plotPostPredStats.R R/plotTree.R R/readOBDP.R R/plotMassExtinctions.R R/readTrace.R R/rerootPhylo.R R/processAncStates.R R/plotDiversityOBDP.R R/global.R R/plotDivRates.R R/plotMuSSE.R R/combineTrace.R R/plotHiSSE.R R/summarizeTrace.R R/simulateMRF.R R/geomStepRibbon.R R/processDivRates.R R/plotTrace.R R/getMAP.R R/removeBurnin.R R/colFun.R R/plotAncStatesMAP.R R/processPostPredStats.R R/RevGadgets.R R/plotTreeFull.R R/posteriorSamplesToParametricPrior.R R/utils.R R/matchNodes.R R/calculateShiftBayesFactor.R

inst/hex_sticker.png

inst/developers_guide.md

inst/extdata/mass_extinction/crocs_mass_extinction_probabilities_mini.p

inst/extdata/sub_models/primates_cytb_GTR_mini.p

inst/extdata/sub_models/primates_cytb_GTR_MAP.tre

inst/extdata/sub_models/primates_cytb_GTR_mini.trees

inst/extdata/epi_bd/primates_EBD_extinction_rates_mini.p

inst/extdata/epi_bd/primates_EBD_speciation_times_mini.p

inst/extdata/epi_bd/primates_EBD_extinction_times_mini.p

inst/extdata/epi_bd/primates_EBD_speciation_rates_mini.p

inst/extdata/obdp/start_time_trace.p

inst/extdata/obdp/mcmc_OBDP_trees.p

inst/extdata/obdp/Kt_trace.p

inst/extdata/comp_method_disc/ase_freeK.tree

inst/extdata/chromo/ChromEvol_simple_final.tree

inst/extdata/fbd/bears.mcc.tre

inst/extdata/beast2/msbd.rates.trees

inst/extdata/relaxed_ou/relaxed_OU_MAP.tre

inst/extdata/pop_size/horses_CPP_times_mini.p

inst/extdata/pop_size/horses_CPP_popsizes_mini.p

inst/extdata/pop_size/horses_constant_popsizes_mini.p

inst/extdata/pop_size/horses_GMRF_popsizes_mini.p

inst/extdata/pop_size/horses_GMRF_times_mini.p

inst/extdata/dec/small_dec.tre

inst/extdata/dec/simple.ase.tre

inst/extdata/graphs/plotDiversityOBDP_df.rds

inst/extdata/graphs/plotPopSizes.rds

inst/extdata/graphs/plotTree_df.rds

inst/extdata/graphs/plotPostPredStats_df.rds

inst/extdata/graphs/plotDivRates_df.rds

inst/extdata/graphs/plotHiSSE_df.rds

inst/extdata/graphs/plotTrace_df.rds

inst/extdata/graphs/plotAncStatesMAP_df.rds

inst/extdata/graphs/plotMassExtinctions_df.rds

inst/extdata/graphs/plotFBDTree_df.rds

inst/extdata/graphs/plotAncStatesPie_df.rds

inst/extdata/graphs/plotMuSSE_df.rds

inst/extdata/graphs/geomStepRibbon_df.rds

inst/extdata/sse/primates_HiSSE_2_mini.p

inst/extdata/sse/primates_BiSSE_activity_period_mini.p

inst/extdata/bds/primates.tre

inst/extdata/bds/primates_BDS_rates_truncated.p

inst/extdata/PPS/empirical_data_pps_example.csv

inst/extdata/PPS/simulated_data_pps_mini.csv

RevGadgets documentation built on May 29, 2024, 10:03 a.m.

rdrr.io home R language documentation Run R code online

CRAN packages Bioconductor packages R-Forge packages GitHub packages

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

RevGadgets
Visualization and Post-Processing of 'RevBayes' Analyses

Files in RevGadgets
Visualization and Post-Processing of 'RevBayes' Analyses

R Package Documentation

Browse R Packages

We want your feedback!

RevGadgets Visualization and Post-Processing of 'RevBayes' Analyses

Files in RevGadgets Visualization and Post-Processing of 'RevBayes' Analyses

R Package Documentation

Browse R Packages

We want your feedback!

RevGadgets
Visualization and Post-Processing of 'RevBayes' Analyses

Files in RevGadgets
Visualization and Post-Processing of 'RevBayes' Analyses