API for SRTsim
Simulator for Spatially Resolved Transcriptomics
| Global functions | |
|---|---|
| EstParam | Man page |
| SRTsim_shiny | Man page Source code |
| Shiny2SRT | Man page Source code |
| compareSRT | Man page Source code |
| convert_grid | Man page Source code |
| createSRT | Man page Source code |
| exampleLIBD | Man page |
| fit_nb_optim | Source code |
| fit_pos_optim | Man page Source code |
| fit_single | Source code |
| fit_zinb_optim | Source code |
| fit_zip_optim | Source code |
| get_metrics_pd | Man page Source code |
| get_new_coordinates2 | Source code |
| get_stats_gene | Man page Source code |
| get_stats_loc | Man page Source code |
| getparams | Source code |
| metaParam | Man page |
| nb_loglik | Source code |
| nb_loglik_mom | Source code |
| pattern_count_func2 | Source code |
| pos_loglik | Source code |
| reGenCountshiny | Man page Source code |
| refCounts | Man page |
| refcolData | Man page |
| refrowData | Man page |
| relative_func | Source code |
| server | Source code |
| simCounts | Man page |
| simNewLocs | Man page Source code |
| simcolData | Man page |
| simrowData | Man page |
| srtsim_cci_free | Man page Source code |
| srtsim_cci_ref | Man page Source code |
| srtsim_count | Man page Source code |
| srtsim_count_affine | Man page Source code |
| srtsim_count_affine_single | Source code |
| srtsim_count_single | Source code |
| srtsim_fit | Man page Source code |
| srtsim_newlocs | Man page Source code |
| srtsim_simulate_count_rank_diff | Source code |
| subsetSRT | Man page Source code |
| toyData | Man page |
| toyShiny | Man page |
| transform_mat_func | Source code |
| visualize_gene | Man page Source code |
| visualize_metric_single | Source code |
| visualize_metrics | Man page Source code |
| vote_func | Source code |
| zinb_loglik | Source code |
| zip_loglik | Source code |
