Shiny2SRT: Create a SRTsim object from reference-free shinyoutput

In SRTsim: Simulator for Spatially Resolved Transcriptomics

Create a SRTsim object from reference-free shinyoutput

Description

Create a SRTsim object from reference-free shinyoutput

Usage

Shiny2SRT(shinyOutput)

Arguments

shinyOutput

A list of Shiny Output. Including a simCount, simInfo,simcountParam,simLocParam

Value

Returns a SRTsim object with user-specified parameters stored in metaParam slot.

Examples

shinySRT <- Shiny2SRT(toyShiny)

## Explore the new SRT object
shinySRT@metaParam
shinySRT@simCounts[1:3,1:3]
shinySRT@simcolData

SRTsim documentation built on Jan. 13, 2023, 5:12 p.m.