compute.delta: Computation of mutation actual effect

Description Usage Arguments Details Value See Also Examples

View source: R/compute.delta.R

Description

Computes the actual effect δ of a mutation

Usage

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compute.delta(nu_fun,E_fun,correl_fun,B_fun=NULL)

Arguments

nu_fun

Numeric. Canonical effect of the mutation

E_fun

Numeric vector of concentrations

correl_fun

Character string indicating the abbreviation of the constraint applied on the system

B_fun

Numeric vector of global co-regulation coefficients

Details

Computes the actual effect δ of a mutation depending on its canonical effect ν and on the constraints.

Value

Numeric vector. Each element i of the vector is the actual effect δ_i for which enzyme i in E_fun is targeted by the mutation.

See Also

Use function is.correl.authorized to see allowed constraints for correl_fun.

Examples

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mu <- 1
E <- c(30,30,30)
beta <- matrix(c(1,10,5,0.1,1,0.5,0.2,2,1),nrow=3)
B <- apply(beta,1,sumbis)
correl <- "RegPos"

compute.delta(mu,E,correl,B)

SimEvolEnzCons documentation built on Oct. 29, 2021, 1:07 a.m.