API for SlimR
Machine Learning-Assisted, Marker-Based Tool for Single-Cell and Spatial Transcriptomics Annotation
| Global functions | |
|---|---|
| .onAttach | Source code |
| Cellmarker2 | Man page |
| Cellmarker2_raw | Man page |
| Cellmarker2_table | Man page |
| Celltype_Annotation | Man page Source code |
| Celltype_Annotation_Combined | Man page Source code |
| Celltype_Annotation_Features | Man page Source code |
| Celltype_Annotation_Heatmap | Man page Source code |
| Celltype_Calculate | Man page Source code |
| Celltype_Verification | Man page Source code |
| Celltype_annotation_Cellmarker2 | Man page Source code |
| Celltype_annotation_Excel | Man page Source code |
| Celltype_annotation_PanglaoDB | Man page Source code |
| Celltype_annotation_Seurat | Man page Source code |
| Markers_filter_Cellmarker2 | Man page Source code |
| Markers_filter_PanglaoDB | Man page Source code |
| Markers_list_PCTAM | Man page |
| Markers_list_PCTIT | Man page |
| Markers_list_TCellSI | Man page |
| Markers_list_scIBD | Man page |
| PanglaoDB | Man page |
| PanglaoDB_raw | Man page |
| PanglaoDB_table | Man page |
| Parameter_Calculate | Man page Source code |
| Read_excel_markers | Man page Source code |
| Read_seurat_markers | Man page Source code |
| calculate_cluster_variability | Man page Source code |
| calculate_expression | Man page Source code |
| calculate_expression_skewness | Man page Source code |
| calculate_probability | Man page Source code |
| estimate_batch_effect | Man page Source code |
| extract_dataset_features | Man page Source code |
| generate_training_data | Man page Source code |
| postprocess_parameters | Man page Source code |
| predict_optimal_parameters | Man page Source code |
| train_parameter_model | Man page Source code |
