SpaDES.core
Core Utilities for Developing and Running Spatially Explicit Discrete Event Models

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SpaDES.core: Core Utilities for Developing and Running Spatially Explicit Discrete Event Models
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API for SpaDES.core
Core Utilities for Developing and Running Spatially Explicit Discrete Event Models

Global functions
._inputObjectsDF Man page
._inputObjectsDF,missing-method Man page
._outputObjectsDF Man page
._outputObjectsDF,missing-method Man page
.addChangedAttr,simList-method Man page
.addDepends Man page
.addDepends,simList,.moduleDeps-method Man page
.addTagsToOutput,simList-method Man page
.cacheMessage,simList-method Man page
.callingFrameTimeunit Man page Source code
.callingModuleName Man page
.callingModuleName,simList-method Man page
.checkCacheRepo,list-method Man page
.checkModuleDirsAndFiles Source code
.checkObjectSynonyms Source code
.checkpointSave Man page Source code
.cleanPkgs Man page Source code
.coreModules Man page Source code
.dealWithRasterBackends Source code
.depsEdgeList Source code
.depsLoadOrder Man page
.depsLoadOrder,simList,igraph-method Man page
.depsPruneEdges Man page
.depsPruneEdges,data.table-method Man page
.emptyEventList Man page
.emptyEventList,missing,missing,missing,missing-method Man page
.emptyEventList,numeric,character,character,numeric-method Man page
.emptyEventListCols Man page
.emptyEventListDT Man page
.emptyMetadata Man page
.emptyMetadata,missing-method Man page
.fileEdit Man page Source code
.fileExtensions Man page Source code
.fileTableIn Man page
.fileTableIn,missing-method Man page
.fileTableInCols Man page
.fileTableInDF Man page
.fileTableOut Man page
.fileTableOut,missing-method Man page
.fileTableOutCols Man page
.fileTableOutDF Man page
.fillInSimInit Source code
.fillInputRows Man page Source code
.fillOutputRows Man page Source code
.findElement Man page Source code
.findElementsInEnv Man page Source code
.findModuleName Man page Source code
.findObjects Man page Source code
.findSimList Man page Source code
.first Man page Source code
.getModuleInputObjects Man page Source code
.getOption Man page Source code
.getTU Source code
.guessPkgFun Man page Source code
.highest Man page Source code
.identifyChildModules Man page Source code
.inputsDefault Source code
.isLastLineSim Source code
.isNamespaced Man page Source code
.isPackage Source code
.keepAttrs Man page Source code
.knownDotParams Man page
.last Man page Source code
.lineNumbersInSrcFile Source code
.loadOrderDefault Source code
.lowest Man page Source code
.messageDeprecatedFn Source code
.modifySearchPath Man page Source code
.moduleDeps Man page
.moduleDeps-class Man page
.moduleNameNoUnderscore Source code
.modulesDefault Source code
.normal Man page Source code
.notOlderThanDefault Source code
.objectsDefault Source code
.onAttach Source code
.onLoad Source code
.onUnload Source code
.outputsDefault Source code
.paramsDefault Source code
.parseConditional Source code
.parseElems,simList-method Man page
.parseMessage Man page Source code
.parseModule Man page
.parseModule,simList,list-method Man page
.parseModulePartial Man page
.parseModulePartial,missing,missing,character,character-method Man page
.parseModulePartial,simList,list,missing,character-method Man page
.parsingSim Man page Source code
.paths Man page Source code
.pathsDefault Source code
.pkgEnv Man page
.preDigestByClass,simList-method Man page
.prepareOutput,simList-method Man page
.quickCheck Man page
.rndstr Man page Source code
.robustDigest,simList-method Man page
.runCodeChecks Man page Source code
.runEvent Source code
.runEventFuture Source code
.runEventWithBrowser Source code
.runForFutureWrapper Source code
.runModuleInputObjects Man page Source code
.saveFileExtensions Man page Source code
.sim2gantt Man page
.sim2gantt,simList,numeric,character,numeric-method Man page
.simDeps Man page
.simDeps-class Man page
.singleEventListDT Man page
.spadesTempDir Source code
.spadesTimes Man page
.tagsByClass,simList-method Man page
.timesDefault Source code
.timeunitDefault Source code
.tryCatch Man page Source code
.unparsed Man page
.unparsed,list-method Man page
.unwrap.simList Man page Source code
.verb Man page Source code
.wrap.simList Man page Source code
Cache Man page
Copy,simList-method Man page
First Source code
FirstFromR Source code
G Man page
G,simList-method Man page
G<- Man page
G<-,simList-method Man page
P Man page Source code
P.simList Source code
P<- Man page
POM Man page Source code
Paths Man page
Plot,simList-method Man page
Plots Man page Source code
RequireWithHandling Source code
SpaDES.core Man page
SpaDES.core-package Man page
[,simList,character,ANY-method Man page
`P<-` Source code
absolutizePaths Source code
activeModBindingFunction Source code
activeParBindingFunction Source code
addNamedEntry Source code
adjustModuleNameSpacing Source code
all.equal.simList Man page Source code
allowSequentialCaching1 Source code
allowSequentialCachingFinal Source code
allowSequentialCachingUpdateTags Source code
anyPlotting Man page Source code
appendCompleted Source code
appendEvents Source code
append_attr Man page
append_attr,list,list-method Man page
archiveConvertFileExt Source code
archiveExtract Source code
archiveWrite Source code
bindrows Man page Source code
buildParentChildGraph Source code
cachePath Man page
cachePath,simList-method Man page
cachePath<- Man page
cachePath<-,simList-method Man page
calculateEventTimeInSeconds Source code
checkAndSetRestartDir Source code
checkArchiveAlternative Source code
checkKnownExts Source code
checkModule Man page
checkModule,character,character-method Man page
checkModule,character,missing-method Man page
checkModuleLocal Man page
checkModuleLocal,character,ANY,ANY-method Man page
checkModuleLocal,character,character,character-method Man page
checkObject Man page
checkObject,missing,ANY,ANY-method Man page
checkObject,simList,ANY,ANY-method Man page
checkObject,simList,character,missing-method Man page
checkParams Man page
checkParams,simList,list-method Man page
checkSimListExts Source code
checkSpaDES.coreMinVersion Source code
checkTimeunit Man page
checkTimeunit,character,environment-method Man page
checkTimeunit,character,missing-method Man page
checkpointFile Man page
checkpointFile,simList-method Man page
checkpointFile<- Man page
checkpointFile<-,simList-method Man page
checkpointInterval Man page
checkpointInterval,simList-method Man page
checkpointInterval<- Man page
checkpointInterval<-,simList-method Man page
checkpointLoad Man page Source code
checksums Man page Source code
citation Man page
citation,character-method Man page
citation,simList-method Man page
classFilter Man page
classFilter,character,character,character,environment-method Man page
classFilter,character,character,character,missing-method Man page
classFilter,character,character,missing,environment-method Man page
classFilter,character,character,missing,missing-method Man page
clearCache,simList-method Man page
clearFileBackedObjs Source code
clearNextEventInCache Source code
completed Man page
completed,simList,character-method Man page
completed,simList,missing-method Man page
completed<- Man page
completed<-,simList-method Man page
conditionalEvents Man page
conditionalEvents,simList,character-method Man page
conditionalEvents,simList,missing-method Man page
convertTimeunit Man page Source code
convertToPackage Man page Source code
copyModule Man page
copyModule,character,character,character-method Man page
copyModule,character,character,missing-method Man page
createsOutput Man page
createsOutput,ANY,ANY,ANY-method Man page
createsOutput,character,character,character-method Man page
current Man page
current,simList,character-method Man page
current,simList,missing-method Man page
current<- Man page
current<-,simList-method Man page
currentModule Man page
currentModule,simList-method Man page
dNA Man page
dNA,ANY-method Man page
dataPath Man page
dataPath,simList-method Man page
dday Man page Source code
dealWithOptions Source code
debugMessTRUE Source code
debugMessage Source code
defineEvent Man page Source code
defineEventFnMaker Source code
defineModule Man page
defineModule,simList,list-method Man page
defineParameter Man page Source code
depends Man page
depends,simList-method Man page
depends<- Man page
depends<-,simList-method Man page
depsEdgeList Man page
depsEdgeList,simList,logical-method Man page
depsEdgeList,simList,missing-method Man page
depsGraph Man page
depsGraph,simList,logical-method Man page
depsGraph,simList,missing-method Man page
dhour Man page Source code
dmin Man page Source code
dmonth Man page Source code
dmonths Man page
dmonths,numeric-method Man page
doEvent Man page Source code
doEvent.checkpoint Man page Source code
doEvent.load Source code
doEvent.progress Source code
doEvent.restartR Source code
doEvent.save Source code
documentation Man page
documentation,simList-method Man page
downloadData Man page
downloadData,character,character,logical-method Man page
downloadData,character,character,missing-method Man page
downloadData,character,missing,logical-method Man page
downloadData,character,missing,missing-method Man page
downloadModule Man page
downloadModule,character,ANY,ANY,ANY,ANY,ANY,ANY,ANY-method Man page
downloadModule,character,character,character,character,logical,l Man page
downloadModule,character,missing,missing,missing,missing,missing Man page
dsecond Man page Source code
dweek Man page Source code
dweeks Man page
dweeks,numeric-method Man page
dyear Man page Source code
dyears Man page
dyears,numeric-method Man page
elapsedTime Man page Source code
elapsedTime.simList Man page Source code
elapsedTimeInSimInit Source code
emptyEventList Man page
end Man page Source code
end.simList Man page Source code
end<- Man page
end<-,simList-method Man page
envir Man page
envir,simList-method Man page
envir<- Man page
envir<-,simList-method Man page
evalAttempt Source code
evalWithActiveCode Source code
eventDiagram Man page
eventDiagram,simList,missing,character-method Man page
eventDiagram,simList,missing,missing-method Man page
eventDiagram,simList,numeric,character-method Man page
eventFnElement Source code
eventFnElementEnvir Source code
events Man page
events,simList,character-method Man page
events,simList,missing-method Man page
events<- Man page
events<-,simList-method Man page
expectsInput Man page
expectsInput,ANY,ANY,ANY,ANY-method Man page
expectsInput,character,character,character,character-method Man page
expectsInput,character,character,character,missing-method Man page
experiment Man page Source code
experiment2 Man page Source code
extractURL Man page
extractURL,character,missing-method Man page
extractURL,character,simList-method Man page
figurePath Man page
figurePath,simList-method Man page
fileName Man page Source code
filenameForMainFunctions Source code
filenameFromFunction Source code
findObjects Man page Source code
findSmallestTU Source code
futureOngoingMemoryThisPid Source code
ganttStatus Man page
ganttStatus,character-method Man page
getDebug Source code
getFutureNeeds Source code
getMapPath Man page Source code
getModuleVersion Man page
getModuleVersion,character,character-method Man page
getModuleVersion,character,missing-method Man page
getPaths Man page Source code
getSampleModules Man page Source code
globals Man page
globals,simList-method Man page
globals<- Man page
globals<-,simList-method Man page
inSeconds Man page Source code
initialize,simList-method Man page
initialize,simList_-method Man page
inputArgs Man page
inputArgs,simList-method Man page
inputArgs<- Man page
inputArgs<-,simList-method Man page
inputObjects Man page
inputObjects,missing-method Man page
inputObjects,simList-method Man page
inputOrOutputObjects Source code
inputPath Man page
inputPath,simList-method Man page
inputPath<- Man page
inputPath<-,simList-method Man page
inputs Man page
inputs,simList-method Man page
inputs<- Man page
inputs<-,simList-method Man page
isExtents Source code
isListedEvent Source code
isTopLevelEnv Source code
isWindows Source code
keepCache,simList-method Man page
loadFiles Man page
loadFiles,missing,ANY-method Man page
loadFiles,missing,missing-method Man page
loadFiles,simList,missing-method Man page
loadPackages Man page Source code
loadPkgs Source code
loadSimList Man page Source code
logPath Man page
logPath,simList-method Man page
loggingMessage Source code
makeEventFn Source code
makeMemoisable.simList Man page Source code
makeModActiveBinding Source code
makeParActiveBinding Source code
makeSimListActiveBindings Source code
maxTimeunit Man page
maxTimeunit,simList-method Man page
memoryLeakWarning Source code
memoryUse Man page Source code
memoryUseOnExit Source code
memoryUseSetup Source code
memoryUseThisSession Man page Source code
messageInterrupt1 Source code
minTimeunit Man page
minTimeunit,list-method Man page
minTimeunit,simList-method Man page
modNameInFuture Source code
moduleCodeFiles Man page Source code
moduleCoverage Man page Source code
moduleDefaults Man page
moduleDiagram Man page
moduleDiagram,simList,ANY,ANY-method Man page
moduleDiagram,simList,character,logical-method Man page
moduleGraph Man page
moduleGraph,simList,logical-method Man page
moduleGraph,simList,missing-method Man page
moduleInputs Man page
moduleInputs,character,character-method Man page
moduleMetadata Man page
moduleMetadata,ANY,ANY,ANY-method Man page
moduleMetadata,missing,character,character-method Man page
moduleMetadata,missing,character,missing-method Man page
moduleNameStripped Source code
moduleObjects Man page Source code
moduleOutputs Man page
moduleOutputs,character,character-method Man page
moduleParams Man page
moduleParams,character,character-method Man page
modulePath Man page
modulePath,simList-method Man page
modulePath<- Man page
modulePath<-,simList-method Man page
moduleVersion Man page
moduleVersion,character,character,missing-method Man page
moduleVersion,character,missing,missing-method Man page
moduleVersion,character,missing,simList-method Man page
modules Man page
modules,simList-method Man page
modules<- Man page
modules<-,simList-method Man page
needInstall Source code
newEnvsByModule Source code
newModule Man page
newModule,character,character-method Man page
newModule,character,missing-method Man page
newModuleCode Man page
newModuleCode,character,character-method Man page
newModuleDocumentation Man page
newModuleDocumentation,character,character-method Man page
newModuleDocumentation,character,missing-method Man page
newModuleTests Man page
newModuleTests,character,character,logical,logical-method Man page
newObjectsCreated Man page Source code
newProgressBar Man page Source code
newProject Man page
newProject,character,character,logical-method Man page
newProject,character,character,missing-method Man page
newProjectCode Man page
newProjectCode,character,character,logical-method Man page
noEventWarning Man page Source code
objSize.simList Man page Source code
objSize2 Source code
objectDiagram Man page
objectDiagram,simList-method Man page
objectSynonyms Man page Source code
objectsCreated Man page
objectsCreatedPost Source code
objs Man page
objs,simList-method Man page
objs<- Man page
objs<-,simList-method Man page
objsAreNull Source code
ongoingMemoryThisPid Source code
openIsRequested Source code
openModules Man page
openModules,character,character-method Man page
openModules,character,missing-method Man page
openModules,missing,character-method Man page
openModules,missing,missing-method Man page
openModules,simList,missing-method Man page
outputArgs Man page
outputArgs,simList-method Man page
outputArgs<- Man page
outputArgs<-,simList-method Man page
outputFilename Source code
outputObjectNames Man page
outputObjectNames,simList-method Man page
outputObjects Man page
outputObjects,missing-method Man page
outputObjects,simList-method Man page
outputPath Man page
outputPath,simList-method Man page
outputPath<- Man page
outputPath<-,simList-method Man page
outputs Man page
outputs,simList-method Man page
outputs<- Man page
outputs<-,simList-method Man page
outputsAppend Source code
packages Man page
packages,ANY-method Man page
paddedFloatToChar Man page
paramCheckOtherMods Man page Source code
parameters Man page
parameters,simList-method Man page
params Man page
params,simList-method Man page
params<- Man page
params<-,simList-method Man page
paths Man page
paths,simList-method Man page
paths<- Man page
paths<-,simList-method Man page
priority Man page
progressInterval Man page
progressInterval,simList-method Man page
progressInterval<- Man page
progressInterval<-,simList-method Man page
progressType Man page
progressType,simList-method Man page
progressType<- Man page
progressType<-,simList-method Man page
rasterCreate Man page Source code
rasterCreate.default Man page Source code
rasterPath Man page
rasterPath,simList-method Man page
rasterPath<- Man page
rasterPath<-,simList-method Man page
rasterToMemory Man page
rasterToMemory,ANY-method Man page
rasterToMemory,character-method Man page
rasterToMemory,list-method Man page
rasterToMemory,simList-method Man page
recoverDataTableFromQs Source code
recoverModeOnExit Source code
recoverModePost Source code
recoverModePre Source code
reexports Man page
registerOutputs Man page Source code
relativizePaths Source code
remoteFileSize Man page Source code
reqdPkgs Man page
reqdPkgs,missing-method Man page
reqdPkgs,simList-method Man page
resolveDepsRunInitIfPoss Source code
resolveFutureNow Source code
restartR Man page Source code
restartSpades Man page Source code
rmExtraSpacesEOL Source code
rmExtraSpacesEOLCollapse Source code
rmExtraSpacesEOLList Source code
rndstr Man page
rndstr,missing,missing,logical-method Man page
rndstr,missing,missing,missing-method Man page
rndstr,missing,numeric,logical-method Man page
rndstr,missing,numeric,missing-method Man page
rndstr,numeric,missing,logical-method Man page
rndstr,numeric,missing,missing-method Man page
rndstr,numeric,numeric,logical-method Man page
rndstr,numeric,numeric,missing-method Man page
runScheduleEventsOnly Source code
saveFiles Man page Source code
saveSim Man page
saveSimList Man page Source code
savedSimEnv Man page Source code
scheduleConditionalEvent Man page Source code
scheduleEvent Man page Source code
scratchPath Man page
scratchPath,simList-method Man page
scratchPath<- Man page
scratchPath<-,simList-method Man page
sessInfo Man page
sessInfo,simList-method Man page
setPaths Man page Source code
setProgressBar Man page Source code
setdiffNamedRecursive Source code
setupDebugger Source code
show,simList-method Man page
showCache,simList-method Man page
simFile Man page Source code
simInit Man page
simInit,ANY,ANY,ANY,ANY,ANY,ANY,ANY,ANY-method Man page
simInit,ANY,ANY,ANY,character,ANY,ANY,ANY,ANY-method Man page
simInit,ANY,ANY,character,ANY,ANY,ANY,ANY,ANY-method Man page
simInit,list,list,list,list,list,data.frame,data.frame,character Man page
simInitAndExperiment Man page Source code
simInitAndSpades Man page Source code
simInitDefaults Man page Source code
simList Man page
simList-accessors-envir Man page
simList-accessors-events Man page
simList-accessors-inout Man page
simList-accessors-metadata Man page
simList-accessors-modules Man page
simList-accessors-objects Man page
simList-accessors-packages Man page
simList-accessors-params Man page
simList-accessors-paths Man page
simList-accessors-times Man page
simList-class Man page
simList_ Man page
simList_-class Man page
simNestingOverride Source code
simNestingSetup Source code
spades Man page
spades,ANY,ANY,ANY,logical-method Man page
spades,simList,ANY,ANY,missing-method Man page
spadesClasses Man page
spadesDefaultFormatter Source code
spadesOptions Man page Source code
spadesTimes Man page Source code
start Man page Source code
start.simList Man page Source code
start<- Man page
start<-,simList-method Man page
stopFilename Source code
stopMessForRequireFail Source code
suppliedElsewhere Man page Source code
terraPath Man page
terraPath,simList-method Man page
terraPath<- Man page
terraPath<-,simList-method Man page
testMemoryLeaks Source code
testObjectForLeak Source code
time.simList Man page Source code
time<- Man page
time<-,simList-method Man page
times Man page
times,simList-method Man page
times<- Man page
times<-,simList-method Man page
timeunit Man page
timeunit,simList-method Man page
timeunit<- Man page
timeunit<-,simList-method Man page
timeunits Man page
timeunits,simList-method Man page
unmakeMemoisable.simList_ Man page Source code
unzipSimList Man page Source code
updateList Man page Source code
updateParamSlotInAllModules Source code
updateParamsFromGlobals Source code
updateParamsSlotFromGlobals Source code
use_gha Man page Source code
warnDeprecFileBacked Source code
warningSplitOnColon Source code
writeEventInfo Man page Source code
writeRNGInfo Man page Source code
zipModule Man page
zipModule,character,character,character-method Man page
zipModule,character,character,missing-method Man page
zipModule,character,missing,character-method Man page
zipModule,character,missing,missing-method Man page
zipSimList Man page Source code
SpaDES.core documentation built on June 22, 2024, 10:32 a.m.

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