Files in SpaDES.core
Core Utilities for Developing and Running Spatially Explicit Discrete Event Models
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/debugging.R
R/priority.R
R/options.R
R/checkpoint.R
R/module-dependencies-class.R
R/project-template.R
R/plotting.R
R/module-dependencies-methods.R
R/save.R
R/code-checking.R
R/paths.R
R/progress.R
R/check.R
R/simulation-simInit.R
R/memory-leaks.R
R/load.R
R/module-define.R
R/module-repository.R
R/copy.R
R/spades-classes.R
R/times.R
R/simulation-spades.R
R/simulation-parseModule.R
R/environment.R
R/suppliedElsewhere.R
R/reexports.R
R/spades-core-deprecated.R
R/saveLoadSimList.R
R/module-template.R
R/moduleMetadata.R
R/cache.R
R/misc-methods.R
R/downloadData.R
R/simList-class.R
R/memory.R
R/moduleCoverage.R
R/simList-accessors.R
R/restart.R
R/zzz.R
R/Plots.R
R/convertToPackage.R
R/modActiveBinding.R
R/spades-core-package.R
R/helpers.R
R/plotting-diagrams.R
R/objectSynonyms.R
inst/WORDLIST
inst/doc/i-introduction.html
inst/doc/i-introduction.Rmd
inst/doc/iii-cache.Rmd
inst/doc/iii-cache.html
inst/doc/ii-modules.Rmd
inst/doc/iv-advanced.R
inst/doc/v-automated-testing.Rmd
inst/doc/v-automated-testing.html
inst/doc/i-introduction.R
inst/doc/iv-advanced.html
inst/doc/iv-advanced.Rmd
inst/doc/ii-modules.html
inst/doc/ii-modules.R
inst/doc/iii-cache.R
inst/doc/v-automated-testing.R
inst/examples/example_inputs.R
inst/examples/example_moduleVersion.R
inst/examples/example_outputs.R
inst/examples/example_moduleMetadata.R
inst/examples/example_moduleParamsInputsOuputs.R
inst/extdata/abundRaster.tif
inst/extdata/abundRaster.tif.aux.xml
inst/templates/modulePartialMeta.R.template
inst/templates/test-template.R.template
inst/templates/module.Rmd.template
inst/templates/citation.bib.template
inst/templates/module.R.template
inst/templates/LICENSE.template
inst/templates/project.R.template
inst/templates/README.template
inst/templates/NEWS.template
inst/templates/modulePartialEvents.R.template
inst/templates/render-module-rmd.yaml.template
inst/templates/unitTests.R.template
inst/templates/data-gitignore.template
inst/sampleModules/fireSpread/fireSpread.R
inst/sampleModules/randomLandscapes/randomLandscapes.R
inst/sampleModules/caribouMovement/caribouMovement.R
inst/sampleModules/SpaDES_sampleModules/SpaDES_sampleModules.pdf
inst/sampleModules/SpaDES_sampleModules/SpaDES_sampleModules.R
inst/sampleModules/SpaDES_sampleModules/SpaDES_sampleModules.Rmd
build/vignette.rds
tests/test-all.R
tests/testthat/test-1memory.R
tests/testthat/test-environment.R
tests/testthat/test-Plots.R
tests/testthat/test-simList.R
tests/testthat/test-save.R
tests/testthat/test-paths.R
tests/testthat/test-downloadModule.R
tests/testthat/test-Copy.R
tests/testthat/test-downloadData.R
tests/testthat/test-misc.R
tests/testthat/test-module-template.R
tests/testthat/test-load.R
tests/testthat/test-userSuppliedObjs.R
tests/testthat/test-futureEvents.R
tests/testthat/test-conditionalEvents.R
tests/testthat/test-checkpoint.R
tests/testthat/test-module-deps-methods.R
tests/testthat/test-cache.R
tests/testthat/test-mod.R
tests/testthat/test-simulation.R
tests/testthat/test-timeunits.R
tests/testthat/helper-initTests.R
tests/testthat/test-objectSynonyms.R
tests/testthat/test-multipleModulePaths.R
vignettes/bibliography.bib
vignettes/i-introduction.Rmd
vignettes/iii-cache.Rmd
vignettes/ii-modules.Rmd
vignettes/v-automated-testing.Rmd
vignettes/iv-advanced.Rmd
man/bindrows.Rd
man/loadFiles.Rd
man/loadSimList.Rd
man/simList-accessors-outputs.Rd
man/maxTimeunit.Rd
man/downloadModule.Rd
man/moduleDeps-class.Rd
man/getOption.Rd
man/moduleGraph.Rd
man/createsOutput.Rd
man/expectsInput.Rd
man/coreModules.Rd
man/findSimList.Rd
man/Copy.Rd
man/fileName.Rd
man/progress.Rd
man/inputObjectsDF.Rd
man/makeMemoisable.Rd
man/reexports.Rd
man/checkModule.Rd
man/fillInputRows.Rd
man/addChangedAttr.Rd
man/newProjectCode.Rd
man/SpaDES.core-package.Rd
man/moduleMetadata.Rd
man/dot-guessPkgFun.Rd
man/cacheMessage.Rd
man/checkpoint.Rd
man/depsLoadOrder.Rd
man/rasterToMemory.Rd
man/runModuleInputsObjects.Rd
man/convertToPackage.Rd
man/defineParameter.Rd
man/anyPlotting.Rd
man/parseMessage.Rd
man/quickCheck.Rd
man/zipModule.Rd
man/newModuleCode.Rd
man/fileTable.Rd
man/robustDigest.Rd
man/all.equal.simList.Rd
man/classFilter.Rd
man/preDigestByClass.Rd
man/newModuleDocumentation.Rd
man/emptyEventList.Rd
man/fileEdit.Rd
man/simList-accessors-envir.Rd
man/rasterCreate.Rd
man/doEvent.Rd
man/simDeps-class.Rd
man/simInit.Rd
man/dot-findObjects.Rd
man/checksums.Rd
man/sub-simList-character-ANY-method.Rd
man/extractURL.Rd
man/spades-classes.Rd
man/simFile.Rd
man/minTimeunit.Rd
man/tryCatch.Rd
man/simList-accessors-times.Rd
man/objectSynonyms.Rd
man/defineModule.Rd
man/scheduleConditionalEvent.Rd
man/initialize-method.Rd
man/moduleDiagram.Rd
man/simInitAndSpades.Rd
man/newModuleTests.Rd
man/writeRNGInfo.Rd
man/timeConversion.Rd
man/ganttStatus.Rd
man/objects.Rd
man/priority.Rd
man/addTagsToOutput.Rd
man/simList-accessors-events.Rd
man/moduleDefaults.Rd
man/depsPruneEdges.Rd
man/objSize.simList.Rd
man/append_attr.Rd
man/sim2gantt.Rd
man/moduleCodeFiles.Rd
man/checkObject.Rd
man/runCodeChecks.Rd
man/openModules.Rd
man/simList-accessors-modules.Rd
man/defineEvent.Rd
man/downloadData.Rd
man/updateList.Rd
man/parseElems.Rd
man/saveFiles.Rd
man/getModuleInputObjects.Rd
man/copyModule.Rd
man/clearCache.Rd
man/emptyMetadata.Rd
man/eventDiagram.Rd
man/modifySearchPath.Rd
man/keepAttrs.Rd
man/namespacing.Rd
man/moduleVersion.Rd
man/checkModuleLocal.Rd
man/spadesOptions.Rd
man/scheduleEvent.Rd
man/dealWithClass.Rd
man/rndstr.Rd
man/verb.Rd
man/remoteFileSize.Rd
man/spadesTime.Rd
man/show-method.Rd
man/packages.Rd
man/identifyChildModules.Rd
man/objectDiagram.Rd
man/globals.Rd
man/getSampleFiles.Rd
man/progressBar.Rd
man/dot-cleanPkgs.Rd
man/parseModule.Rd
man/paramCheckOtherMods.Rd
man/simList-class.Rd
man/addDepends.Rd
man/citation.Rd
man/deprecated.Rd
man/moduleParamsInputsOuputs.Rd
man/simList-accessors-paths.Rd
man/unparsed.Rd
man/saveSimList.Rd
man/simList-accessors-inputs.Rd
man/moduleCoverage.Rd
man/checkCacheRepo.Rd
man/spades.Rd
man/setPaths.Rd
man/memoryUse.Rd
man/depsEdgeList.Rd
man/writeEventInfo.Rd
man/findElements.Rd
man/newModule.Rd
man/checkParams.Rd
man/getModuleVersion.Rd
man/use_gha.Rd
man/simList-accessors-metadata.Rd
man/depsGraph.Rd
man/fillOutputRows.Rd
man/newProject.Rd
man/restartR.Rd
man/findModuleName.Rd
man/params.Rd
man/isNamespaced.Rd
man/prepareOutput.Rd
man/Plot.Rd
man/suppliedElsewhere.Rd
man/tagsByClass.Rd
man/Plots.Rd
man/restartSpades.Rd
man/pkgEnv.Rd
man/figures/SpaDES.png
man/figures/SpaDES-overview-diagram.png
man/figures/scoping.png
