| Analyze | R Documentation | 
dataList.
The test or rating scale data have already been processed by function 
make_dataList or other code to produce the list object 
dataList.  The user defines a list vector ParameterList which 
stores results from a set of cycles of estimating surprisal curves followed 
by estimating optimal score index values for each examinee or respondent.  
These score index values are within the interval [0,100].  The number of 
analysis cycles is the length of the parmList list vector.
  Analyze(index, indexQnt, dataList, NumDensBasis=7, norder=4, ncycle=10,  
          itdisp=FALSE, verbose=FALSE) 
| index | A vector of  | 
| indexQnt | A vector of length  | 
| dataList | A list that contains the objects needed to analyse the test or rating scale with the following fields: 
 | 
| NumDensBasis | The number of basis functions for representing the score density. | 
| norder | The order of the Bspline basis functions. | 
| ncycle | The number of cycles executed by function  | 
| itdisp | If TRUE, the progress of the iterations within each cycle for estimating index are reported. | 
| verbose | If TRUE, the stages of analysis within each cycle for estimating index are reported. | 
The cycling process is described in detail in the references, and displayed 
in R code in the vignette SweSATQuantitativeAnalysis.
The list vector parmList where each member is a named list object 
containing the results of an analysis cycle.  These results are:
| index: | The optimal estimates of the score index values for the 
examinees/respondents.  This is a vector of length  | 
| indexQnt: | A vector of length 2*nbin+1 containing bin boundaries alternating with bin edges. | 
| SfdList: | A list vector containing results from the estimation of 
surprisal curves. The list vector is of length  | 
| meanF: | For each person, the mean of the optimal fitting function values. | 
| binctr: | A vector of length  | 
| bdry: | A vector of length  | 
| freq: | A vector of length  | 
| pdf_fd | Functional probability curves | 
| logdensfd: | A functional data object defining the estimate of the log of the probability density function for the distribution of the score index values. | 
| C: | The normalizing value for probability density functions. A density value is computed by dividing the exponential of the log density value by this constant. | 
| denscdf: | The values over a fine mesh of the cumulative probability 
distribution function. These values start at 0 and end with 1 and are 
increasing.  Ties are often found at the upper boundary, so that using these 
values for interpolation purposes may require using the vector 
 | 
| indcdf | Equally spaced index values to match the number in denscdf. | 
| Qvec | Locations of the marker percents. | 
| index | The positions of each test taker on the score index continuum. | 
| Fval: | A vector of length N containing the values of the negative log likelihood fitting criterion. | 
| DFval: | A vector of length N containing the values of the first derivative of the negative log likelihood fitting criterion. | 
| D2Fval: | A vector of length N containing the values of the second derivative of the negative log likelihood fitting criterion. | 
| active: | A vector of length N of the activity status of the values of index. If convergence was not achieved, the value is TRUE, otherwise FALSE. | 
| infoSurp: | The length of the space curve defined by the surprisal curves. | 
Juan Li and James Ramsay
Ramsay, J. O., Li J. and Wiberg, M. (2020) Full information optimal scoring. Journal of Educational and Behavioral Statistics, 45, 297-315.
Ramsay, J. O., Li J. and Wiberg, M. (2020) Better rating scale scores with information-based psychometrics. Psych, 2, 347-360.
make_dataList,
        TG_analysis,
        index_distn,
        index2info,
        index_fun,
        Sbinsmth
## Not run: 
  #  Example 1:  Input choice data and key for the short version of the 
  #  SweSAT quantitative multiple choice test with 24 items and 1000 examinees
  #  input the choice data as 1000 strings of length 24
  #  setup the input data list object
  dataList <- Quant_13B_problem_dataList
  #  define the initial examinee indices and bin locations
  index    <- dataList$percntrnk
  indexQnt <- dataList$indexQnt
  #  Set the number of cycles (default 10 but here 5)
  ncycle <- 5
  parmListvec <- Analyze(index, indexQnt, ncycle=ncycle, dataList, 
                         verbose=TRUE) 
  #  two column matrix containing the mean fit and arclength values
  #  for each cycle
  HALsave <- matrix(0,ncycle,2)
  for (icycle in 1:ncycle) {
    HALsave[icycle,1] <- parmListvec[[icycle]]$meanF
    HALsave[icycle,2] <- parmListvec[[icycle]]$infoSurp
  }
  #  plot the progress over the cycles of mean fit and arc length
  par(mfrow=c(2,1))
  plot(1:ncycle, HALsave[,1], type="b", lwd=2, 
       xlab="Cycle Number",ylab="Mean H")
  plot(1:ncycle, HALsave[,2], type="b", lwd=2, 
       xlab="Cycle Number", ylab="Arc Length")
## End(Not run)
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