TreeSearch: Phylogenetic Tree Search Using Custom Optimality Criteria
Version 0.2.0

Searches for phylogenetic trees that are optimal using a user-defined criterion. Implements Profile Parsimony (Faith and Trueman, 2001) , and Successive Approximations (Farris, 1969) . Handles inapplicable data using the algorithm of Brazeau Guillerme and Smith (2017) .

Package details

AuthorMartin R. Smith [aut, cre, cph] (<https://orcid.org/0000-0001-5660-1727>), Emmanuel Paradis [cph], Martin Brazeau [cph]
Date of publication2018-09-11 11:00:02 UTC
MaintainerMartin R. Smith <[email protected]>
LicenseGPL (>= 3)
Version0.2.0
URL https://github.com/ms609/TreeSearch
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("TreeSearch")

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TreeSearch documentation built on Sept. 11, 2018, 5:05 p.m.