mpl_init_Morphy: Sets up the dimensions of the dataset.
In TreeSearch: Phylogenetic Analysis with Discrete Character Data

mpl_init_Morphy

R Documentation

Sets up the dimensions of the dataset.

Description

Provides initial dimensions for the dataset, which will constrain any input matrix supplied to Morphy.

Usage

mpl_init_Morphy(numtaxa, numchars, morphyobj)

Arguments

`numtaxa`	The number of taxa (or tips/terminals).
`numchars`	The number of characters (i.e. transformation series) in the data set.
`morphyobj`	An instance of the Morphy object.

Value

Morphy error code.

Author(s)

Martin Brazeau

Other Morphy API functions: GapHandler(), MorphyErrorCheck(), MorphyWeights(), PhyDat2Morphy(), SingleCharMorphy(), UnloadMorphy(), is.morphyPtr(), mpl_apply_tipdata(), mpl_attach_rawdata(), mpl_attach_symbols(), mpl_delete_Morphy(), mpl_delete_rawdata(), mpl_first_down_recon(), mpl_first_up_recon(), mpl_get_charac_weight(), mpl_get_gaphandl(), mpl_get_num_charac(), mpl_get_num_internal_nodes(), mpl_get_numtaxa(), mpl_get_symbols(), mpl_new_Morphy(), mpl_second_down_recon(), mpl_second_up_recon(), mpl_set_charac_weight(), mpl_set_num_internal_nodes(), mpl_set_parsim_t(), mpl_translate_error(), mpl_update_lower_root(), mpl_update_tip(), summary.morphyPtr()