mpl_attach_rawdata: Attach raw character state data (i.e. tip data).

In TreeSearch: Phylogenetic Analysis with Discrete Character Data

Attach raw character state data (i.e. tip data).

Description

Attaches a raw data character state matrix in the form of a C-style (i.e. NULL-terminated) string. This can be the matrix block extracted from a Nexus file or an xread table format. The matrix should contain no leaf labels.

Usage

mpl_attach_rawdata(rawdata, morphyobj)

Arguments

rawdata	C-style string corresponding to the tip data for each taxon in turn.
morphyobj	An instance of the Morphy object.

Value

Morphy error code.

Author(s)

Martin Brazeau

See Also

Other Morphy API functions: GapHandler(), MorphyErrorCheck(), MorphyWeights(), PhyDat2Morphy(), SingleCharMorphy(), UnloadMorphy(), is.morphyPtr(), mpl_apply_tipdata(), mpl_attach_symbols(), mpl_delete_Morphy(), mpl_delete_rawdata(), mpl_first_down_recon(), mpl_first_up_recon(), mpl_get_charac_weight(), mpl_get_gaphandl(), mpl_get_num_charac(), mpl_get_num_internal_nodes(), mpl_get_numtaxa(), mpl_get_symbols(), mpl_init_Morphy(), mpl_new_Morphy(), mpl_second_down_recon(), mpl_second_up_recon(), mpl_set_charac_weight(), mpl_set_num_internal_nodes(), mpl_set_parsim_t(), mpl_translate_error(), mpl_update_lower_root(), mpl_update_tip(), summary.morphyPtr()

TreeSearch documentation built on Aug. 26, 2023, 9:06 a.m.