mpl_set_parsim_t: Sets a character's parsimony function type
In TreeSearch: Phylogenetic Analysis with Discrete Character Data

mpl_set_parsim_t

R Documentation

Sets a character's parsimony function type

Description

Set the parsimony function type to one defined in the morphydefs.h header file. Setting the character to type NONE_T will also cause it to be excluded from any further calculations.

Usage

mpl_set_parsim_t(char_id, tname = "typename", morphyobj)

Arguments

`char_id`	The number of the character (transformation series) as defined in the input matrix. The first character is numbered 1 (one).
`tname`	The parsimony function type as defined in morphydefs.h
`morphyobj`	An instance of the Morphy object.

Value

A Morphy error code.

Author(s)

Martin Brazeau

Other Morphy API functions: GapHandler(), MorphyErrorCheck(), MorphyWeights(), PhyDat2Morphy(), SingleCharMorphy(), UnloadMorphy(), is.morphyPtr(), mpl_apply_tipdata(), mpl_attach_rawdata(), mpl_attach_symbols(), mpl_delete_Morphy(), mpl_delete_rawdata(), mpl_first_down_recon(), mpl_first_up_recon(), mpl_get_charac_weight(), mpl_get_gaphandl(), mpl_get_num_charac(), mpl_get_num_internal_nodes(), mpl_get_numtaxa(), mpl_get_symbols(), mpl_init_Morphy(), mpl_new_Morphy(), mpl_second_down_recon(), mpl_second_up_recon(), mpl_set_charac_weight(), mpl_set_num_internal_nodes(), mpl_translate_error(), mpl_update_lower_root(), mpl_update_tip(), summary.morphyPtr()